Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.78□□□□□ -1.8
CDX1P47902 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CDX1P47902 AC107982.3-201ENST00000584957 985 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AL035411.2-201ENST00000604022 421 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AL121932.1-201ENST00000605542 214 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AC106052.1-201ENST00000608029 497 ntBASIC3.78□□□□□ -1.8
CDX1P47902 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.78□□□□□ -1.8
CDX1P47902 AL050303.3-201ENST00000613704 284 ntBASIC3.78□□□□□ -1.8
CDX1P47902 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 AC068787.1-201ENST00000623908 691 ntBASIC3.78□□□□□ -1.8
CDX1P47902 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDX1P47902 NCLP2-201ENST00000416078 1462 ntBASIC3.78□□□□□ -1.8
CDX1P47902 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CDX1P47902 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.78□□□□□ -1.81
CDX1P47902 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
CDX1P47902 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDX1P47902 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CDX1P47902 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
CDX1P47902 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.77□□□□□ -1.81
CDX1P47902 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AC008758.3-201ENST00000507003 1829 ntBASIC3.77□□□□□ -1.81
CDX1P47902 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDX1P47902 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDX1P47902 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDX1P47902 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDX1P47902 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.77□□□□□ -1.81
CDX1P47902 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.77□□□□□ -1.81
CDX1P47902 ZNF734P-201ENST00000419494 1534 ntBASIC3.77□□□□□ -1.81
CDX1P47902 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDX1P47902 RNU6-906P-201ENST00000384700 70 ntBASIC3.77□□□□□ -1.81
CDX1P47902 MIR298-201ENST00000401212 88 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AL161449.1-201ENST00000414531 1199 ntBASIC3.77□□□□□ -1.81
CDX1P47902 BX510359.2-201ENST00000417920 305 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AL513175.2-201ENST00000422071 443 ntBASIC3.77□□□□□ -1.81
CDX1P47902 RPS27AP12-201ENST00000429552 465 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AC092162.1-201ENST00000432828 434 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AP000926.1-201ENST00000479573 241 ntBASIC3.77□□□□□ -1.81
CDX1P47902 RPS26P15-201ENST00000488067 348 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC011005.3-201ENST00000491624 395 ntBASIC3.77□□□□□ -1.81
CDX1P47902 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AC034205.1-201ENST00000520621 638 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.77□□□□□ -1.81
CDX1P47902 OR4R3P-201ENST00000525084 838 ntBASIC3.77□□□□□ -1.81
CDX1P47902 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
CDX1P47902 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
CDX1P47902 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.77□□□□□ -1.81
CDX1P47902 SULT1C2P1-202ENST00000562418 459 ntBASIC3.77□□□□□ -1.81
CDX1P47902 SNORA74C-1-201ENST00000580726 201 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC005412.1-201ENST00000580812 1049 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC008759.1-201ENST00000589783 983 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.77□□□□□ -1.81
CDX1P47902 AL161616.1-201ENST00000611867 286 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AL078595.3-201ENST00000623815 1166 ntBASIC3.77□□□□□ -1.81
CDX1P47902 MKKS-204ENST00000639674 192 ntBASIC3.77□□□□□ -1.81
CDX1P47902 AC027287.1-201ENST00000553115 1453 ntBASIC3.77□□□□□ -1.81
CDX1P47902 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDX1P47902 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.77□□□□□ -1.81
CDX1P47902 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.77□□□□□ -1.81
CDX1P47902 AL359893.1-201ENST00000447628 1580 ntBASIC3.76□□□□□ -1.81
CDX1P47902 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDX1P47902 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CDX1P47902 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDX1P47902 Y_RNA.25-201ENST00000362528 102 ntBASIC3.76□□□□□ -1.81
CDX1P47902 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.76□□□□□ -1.81
CDX1P47902 RPS4XP9-201ENST00000405151 780 ntBASIC3.76□□□□□ -1.81
CDX1P47902 OR8G2P-201ENST00000412796 908 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AL590139.1-201ENST00000416267 400 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AL356320.2-201ENST00000417263 507 ntBASIC3.76□□□□□ -1.81
CDX1P47902 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.76□□□□□ -1.81
CDX1P47902 AC092832.1-201ENST00000422934 400 ntBASIC3.76□□□□□ -1.81
CDX1P47902 RGS17P1-201ENST00000423358 553 ntBASIC3.76□□□□□ -1.81
CDX1P47902 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.76□□□□□ -1.81
CDX1P47902 AC073052.1-201ENST00000440417 714 ntBASIC3.76□□□□□ -1.81
CDX1P47902 VN1R25P-201ENST00000443385 738 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC000111.2-201ENST00000448200 210 ntBASIC3.76□□□□□ -1.81
CDX1P47902 RFC5P1-201ENST00000454419 874 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC022034.3-201ENST00000471393 478 ntBASIC3.76□□□□□ -1.81
CDX1P47902 OR4G11P-201ENST00000492842 939 ntBASIC3.76□□□□□ -1.81
CDX1P47902 KLRA1P-201ENST00000503499 986 ntBASIC3.76□□□□□ -1.81
CDX1P47902 MTCYBP16-201ENST00000509187 1129 ntBASIC3.76□□□□□ -1.81
CDX1P47902 RN7SKP276-201ENST00000516242 268 ntBASIC3.76□□□□□ -1.81
CDX1P47902 RNU6-1225P-201ENST00000516336 65 ntBASIC3.76□□□□□ -1.81
CDX1P47902 RNU6-1261P-201ENST00000517194 104 ntBASIC3.76□□□□□ -1.81
CDX1P47902 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.76□□□□□ -1.81
CDX1P47902 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.76□□□□□ -1.81
CDX1P47902 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.76□□□□□ -1.81
CDX1P47902 TRAV15-201ENST00000556680 249 ntBASIC3.76□□□□□ -1.81
CDX1P47902 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.76□□□□□ -1.81
CDX1P47902 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms