Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AL606490.7-201ENST00000433136 191 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 RPL21P110-201ENST00000433345 446 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC023512.1-201ENST00000444513 499 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AP002345.1-201ENST00000456493 928 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AC010307.1-201ENST00000467206 836 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.83□□□□□ -1.8
TNFSF9P41273 RNU6-491P-201ENST00000516099 110 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 RNU6-579P-201ENST00000516879 102 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 NARSP2-201ENST00000518524 679 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC074029.2-201ENST00000551045 634 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFSF9P41273 MIR4512-201ENST00000583257 77 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 HMGB1P50-201ENST00000605814 607 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC015967.1-201ENST00000619893 476 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AC067852.7-201ENST00000623270 535 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
TNFSF9P41273 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TNFSF9P41273 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TNFSF9P41273 MTCO1P12-201ENST00000414273 1543 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.83□□□□□ -1.8
TNFSF9P41273 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.83□□□□□ -1.8
TNFSF9P41273 AL592437.2-201ENST00000421655 2434 ntBASIC3.83□□□□□ -1.8
TNFSF9P41273 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TNFSF9P41273 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TNFSF9P41273 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
TNFSF9P41273 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 OR10J6P-201ENST00000289731 930 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TNFSF9P41273 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 MIR7-1-201ENST00000384871 110 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 MIR183-201ENST00000384958 110 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 AC114814.2-201ENST00000419195 485 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AL035458.1-201ENST00000433096 585 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.82□□□□□ -1.8
TNFSF9P41273 AL031663.1-201ENST00000437445 219 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC092641.1-201ENST00000440229 772 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.82□□□□□ -1.8
TNFSF9P41273 PRDX3P3-201ENST00000447765 522 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 RPL26P28-201ENST00000451325 435 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 RBMY2UP-201ENST00000453474 324 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 ANP32BP2-201ENST00000454525 545 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 AC016550.3-201ENST00000515706 767 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AP006245.1-201ENST00000522549 120 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 TRAV11-201ENST00000539512 339 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TNFSF9P41273 AL121576.1-201ENST00000556055 276 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 MIR4458-201ENST00000578872 75 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC022387.2-201ENST00000604050 448 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC115621.1-201ENST00000604653 858 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC073111.2-201ENST00000605657 1075 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AL159169.3-201ENST00000608871 561 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 AC011472.4-201ENST00000615848 491 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC123768.4-201ENST00000616244 701 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AC007342.8-201ENST00000623278 678 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 AL359715.5-201ENST00000623431 443 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.82□□□□□ -1.8
TNFSF9P41273 MIR6715B-201ENST00000637172 77 ntBASIC3.82□□□□□ -1.8
TNFSF9P41273 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
TNFSF9P41273 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TNFSF9P41273 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 SNORD17-201ENST00000390930 237 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 RN7SKP56-201ENST00000410513 331 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 MTND4P11-201ENST00000417020 1058 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TNFSF9P41273 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF9P41273 PLGLA-201ENST00000465668 449 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 MTND3P6-201ENST00000485242 339 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC108120.2-201ENST00000512973 294 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms