Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD13P35453 RN7SL481P-201ENST00000477764 299 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC006517.1-201ENST00000480485 328 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC105137.1-201ENST00000484355 562 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC096571.1-202ENST00000506634 735 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC018797.3-201ENST00000513388 1241 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD13P35453 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 IFITM8P-201ENST00000522529 394 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC021451.1-201ENST00000523498 1129 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AP003730.1-201ENST00000524605 285 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC069240.1-201ENST00000548774 375 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC069366.1-201ENST00000583159 838 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 AL121652.1-201ENST00000608851 448 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 MLECP1-201ENST00000615893 709 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXD13P35453 AC084824.4-201ENST00000620106 731 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 MIR6758-201ENST00000620653 63 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 AL512506.2-201ENST00000624472 458 ntBASIC4.57□□□□□ -1.68
HOXD13P35453 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
HOXD13P35453 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HOXD13P35453 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 MTND5P31-201ENST00000419366 1374 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD13P35453 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 RNU6-839P-201ENST00000363347 108 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HOXD13P35453 RNU6-356P-201ENST00000384140 107 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 RNU6-441P-201ENST00000384545 106 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 MIR141-201ENST00000384975 95 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 ENSAP1-201ENST00000392855 326 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 OR6C69P-201ENST00000394268 893 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AL139098.1-201ENST00000407291 389 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 Y_RNA.625-201ENST00000411256 107 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC073264.1-201ENST00000411508 416 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 RPP40P1-201ENST00000426762 456 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 GTF2IP3-201ENST00000433887 494 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXD13P35453 AC006011.1-201ENST00000442758 349 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 Z77249.1-201ENST00000444622 1175 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 NF1P3-201ENST00000457709 450 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC146507.1-201ENST00000468335 354 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 UQCRHP4-201ENST00000471686 272 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC026979.1-201ENST00000492525 396 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 RNF138P1-201ENST00000502765 546 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 HPRT1P1-201ENST00000509498 657 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC093755.1-201ENST00000512950 1023 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 SNORA19.3-201ENST00000516165 130 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 SCARNA1-201ENST00000517138 166 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 OR8L1P-201ENST00000534005 955 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXD13P35453 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD13P35453 AC122134.1-202ENST00000569111 1201 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXD13P35453 MIR4284-201ENST00000578924 81 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 AC069431.2-201ENST00000604149 1099 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AL445435.1-201ENST00000604232 665 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 AC015813.4-201ENST00000610469 179 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 OR52H1-202ENST00000641796 1061 ntBASIC4.56□□□□□ -1.68
HOXD13P35453 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXD13P35453 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXD13P35453 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD13P35453 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXD13P35453 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms