Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC020914.6-201ENST00000594327 272 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 MIR6853-201ENST00000619642 74 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 AL031667.3-201ENST00000620124 655 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.63□□□□□ -1.51
CNGA1P29973 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.63□□□□□ -1.51
CNGA1P29973 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CNGA1P29973 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNGA1P29973 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.63□□□□□ -1.51
CNGA1P29973 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNGA1P29973 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNGA1P29973 SAGE2P-201ENST00000420011 2126 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 Y_RNA.560-201ENST00000384689 102 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CNGA1P29973 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC073264.1-201ENST00000411508 416 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AL133384.1-201ENST00000412744 351 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 OR2B7P-201ENST00000429302 934 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC092427.1-201ENST00000439177 601 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.62□□□□□ -1.51
CNGA1P29973 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AURKAPS2-201ENST00000454983 333 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 RPL31P3-201ENST00000458430 332 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC092757.1-201ENST00000467293 467 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CNGA1P29973 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.62□□□□□ -1.51
CNGA1P29973 DEFB131D-201ENST00000526803 184 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.62□□□□□ -1.51
CNGA1P29973 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC233702.9-201ENST00000581528 203 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC011477.5-201ENST00000586571 259 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 OR2AS2P-201ENST00000606902 342 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC024560.3-201ENST00000608482 349 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC108359.1-201ENST00000616451 1211 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AC068722.2-201ENST00000618734 544 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 PCMTD1P7-201ENST00000634506 357 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC021755.1-201ENST00000559747 1447 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.62□□□□□ -1.51
CNGA1P29973 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CNGA1P29973 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CNGA1P29973 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.62□□□□□ -1.51
CNGA1P29973 AC011978.2-201ENST00000569835 2054 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 AP001642.1-201ENST00000624727 2117 ntBASIC5.62□□□□□ -1.51
CNGA1P29973 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CNGA1P29973 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.62□□□□□ -1.51
CNGA1P29973 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CNGA1P29973 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 AL590240.1-201ENST00000334118 313 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 Y_RNA.18-201ENST00000362461 102 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 ERCC6-202ENST00000374127 1782 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 U3.22-201ENST00000391120 215 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AL390316.1-201ENST00000406279 553 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.61□□□□□ -1.51
CNGA1P29973 SNORA77-201ENST00000408716 125 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 COX5BP7-201ENST00000414780 274 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 SEPT2P1-201ENST00000419651 180 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 RSL24D1P6-201ENST00000426934 401 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.61□□□□□ -1.51
CNGA1P29973 SAGE4P-201ENST00000442271 3381 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.61□□□□□ -1.51
CNGA1P29973 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CNGA1P29973 PRPF38AP1-201ENST00000451976 933 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC091180.1-201ENST00000462104 372 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.61□□□□□ -1.51
CNGA1P29973 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CNGA1P29973 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.61□□□□□ -1.51
CNGA1P29973 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.61□□□□□ -1.51
CNGA1P29973 AC090819.1-201ENST00000523800 1111 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 ZNF705CP-201ENST00000530515 889 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.61□□□□□ -1.51
CNGA1P29973 AC124068.1-201ENST00000563131 678 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.61□□□□□ -1.51
CNGA1P29973 KARSP3-201ENST00000571212 1504 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC011260.1-201ENST00000578420 472 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 MIR4715-201ENST00000584117 79 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 NBR2-204ENST00000587322 63 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.61□□□□□ -1.51
CNGA1P29973 AL590229.1-201ENST00000603497 542 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AL590392.1-201ENST00000604960 446 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC019206.1-201ENST00000621938 425 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC073530.2-201ENST00000623987 261 ntBASIC5.61□□□□□ -1.51
CNGA1P29973 AC007494.3-201ENST00000624660 743 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms