Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTPN6P29350 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PTPN6P29350 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.88□□□□□ -1.79
PTPN6P29350 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPN6P29350 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 RNU2-21P-201ENST00000410368 188 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN6P29350 RAC1P3-201ENST00000416129 580 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN6P29350 RPL23AP38-201ENST00000423801 469 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC115285.1-201ENST00000424879 736 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN6P29350 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN6P29350 RPL23AP33-201ENST00000442301 452 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 NUTF2P7-201ENST00000453086 375 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 RPL23AP2-201ENST00000471227 466 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.87□□□□□ -1.79
PTPN6P29350 AC126121.1-201ENST00000482313 553 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AF213884.1-201ENST00000488102 463 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN6P29350 MTCO1P30-201ENST00000515244 580 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 SNORA31.9-201ENST00000516429 84 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 SOD1P3-201ENST00000518682 454 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 HMGB1P1-201ENST00000522557 636 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC105233.3-201ENST00000531125 744 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AP004242.1-201ENST00000533701 349 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.87□□□□□ -1.79
PTPN6P29350 AC022968.1-201ENST00000567372 442 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 AC022655.2-201ENST00000577280 318 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC006270.2-201ENST00000578523 652 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC124283.4-201ENST00000581815 456 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPN6P29350 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPN6P29350 AC025946.2-201ENST00000603398 234 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC128687.2-201ENST00000609657 566 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 MIR8059-201ENST00000620427 81 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 AC068724.3-201ENST00000625906 87 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 MTCO1P24-201ENST00000515438 1558 ntBASIC3.87□□□□□ -1.79
PTPN6P29350 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPN6P29350 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPN6P29350 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPN6P29350 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN6P29350 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN6P29350 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PTPN6P29350 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN6P29350 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPN6P29350 PRRC2CP1-201ENST00000404428 159 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 BTBD10P2-201ENST00000404779 676 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 SNORA11-201ENST00000408789 128 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 RN7SKP182-201ENST00000410772 298 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC092647.1-201ENST00000420654 287 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AL391219.1-201ENST00000422570 483 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 COX6B1P7-201ENST00000430845 235 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AL358472.1-201ENST00000431295 329 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 HMGN2P21-201ENST00000447764 270 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AL096803.2-201ENST00000450032 677 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC233982.1-201ENST00000451247 436 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC008280.2-201ENST00000455473 307 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 RPL7P19-201ENST00000469948 618 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 TMED11P-201ENST00000479478 690 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 TPT1P3-201ENST00000492841 512 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 HPRT1P2-201ENST00000505250 544 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC099522.1-202ENST00000514718 367 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.86□□□□□ -1.79
PTPN6P29350 RN7SKP21-201ENST00000516503 220 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 IGLVIV-53-201ENST00000520107 367 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN6P29350 MTND2P26-201ENST00000528255 1029 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC011611.5-201ENST00000552477 578 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC025884.1-201ENST00000556034 378 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 RPL23AP87-202ENST00000573039 466 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AC018754.1-201ENST00000607486 925 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPN6P29350 AC023043.4-201ENST00000612081 449 ntBASIC3.86□□□□□ -1.79
PTPN6P29350 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms