Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 Z95152.1-201ENST00000453556 656 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 RPL21P11-201ENST00000461458 483 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 RPL21P104-201ENST00000464143 478 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 VN1R17P-201ENST00000472048 1090 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AL161747.1-201ENST00000480068 358 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 NCOR1P1-202ENST00000486162 291 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC093267.1-201ENST00000489176 961 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC114967.1-201ENST00000504890 259 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC104997.1-201ENST00000519761 717 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 IGHV3-76-201ENST00000522465 295 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 OR4V1P-201ENST00000525394 1140 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 MIR3690-201ENST00000580266 75 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 AC112230.1-201ENST00000604342 547 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
HLA-DMAP28067 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DMAP28067 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DMAP28067 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DMAP28067 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.21□□□□□ -1.89
HLA-DMAP28067 AC021755.1-201ENST00000559747 1447 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 MIR383-201ENST00000362257 73 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 RNA5SP383-201ENST00000362934 120 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL355379.1-201ENST00000405542 640 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 RN7SKP278-201ENST00000410504 342 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 TPT1P2-201ENST00000413105 503 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 NUP35P2-201ENST00000416748 943 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 MTCO1P43-201ENST00000431831 488 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 MRPL50P1-201ENST00000431951 384 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 CBX1P1-201ENST00000440184 427 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL662791.1-201ENST00000441992 928 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC006463.2-201ENST00000473326 348 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 HMGB3P14-201ENST00000494195 599 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 RN7SKP277-201ENST00000516895 283 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 MIR4715-201ENST00000584117 79 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC013244.1-201ENST00000604279 193 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC073111.2-201ENST00000605657 1075 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 U6.48-201ENST00000618523 106 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AC010608.2-201ENST00000624830 470 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
HLA-DMAP28067 LARP1BP1-201ENST00000506036 1359 ntBASIC3.21□□□□□ -1.9
HLA-DMAP28067 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DMAP28067 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC011978.2-201ENST00000569835 2054 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 RNA5SP366-201ENST00000365454 123 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 MIR550A3-201ENST00000390735 95 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DMAP28067 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DMAP28067 AC108032.1-201ENST00000416706 207 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms