Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF4P23510 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 RN7SL30P-201ENST00000488416 306 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF4P23510 SCARNA21.2-201ENST00000516600 166 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 NDUFA5P2-201ENST00000519723 344 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF4P23510 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.56□□□□□ -1.68
TNFSF4P23510 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.56□□□□□ -1.68
TNFSF4P23510 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF4P23510 AP004607.2-201ENST00000533949 322 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 ROCK1P1-201ENST00000573767 549 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 MIR3176-201ENST00000582210 90 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 AC008507.1-201ENST00000587506 734 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF4P23510 AL512329.2-201ENST00000607350 548 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 AC097468.3-201ENST00000607956 456 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 MIR6133-201ENST00000617057 108 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF4P23510 Z69908.1-201ENST00000622603 247 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 AC091925.2-201ENST00000625059 256 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.56□□□□□ -1.68
TNFSF4P23510 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 LINC01739-205ENST00000641890 573 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF4P23510 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF4P23510 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.56□□□□□ -1.68
TNFSF4P23510 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.56□□□□□ -1.68
TNFSF4P23510 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF4P23510 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
TNFSF4P23510 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TNFSF4P23510 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF4P23510 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFSF4P23510 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 RNU6-263P-201ENST00000363811 107 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 RNA5SP455-201ENST00000365190 119 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 SNORA26.8-201ENST00000391306 124 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 DBIP1-201ENST00000401435 260 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 NPM1P11-201ENST00000417106 855 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 RPS27AP14-201ENST00000422868 454 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AL161722.2-201ENST00000434731 981 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 MTND4P32-201ENST00000437189 1237 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.55□□□□□ -1.68
TNFSF4P23510 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC073387.1-201ENST00000453261 709 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 snoU13.8-201ENST00000458890 104 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC074386.1-201ENST00000476560 767 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 RN7SL727P-201ENST00000482164 296 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC023424.2-201ENST00000493479 777 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 OR2A20P-203ENST00000498397 1268 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 COX7A2P2-201ENST00000505291 250 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AC034159.1-201ENST00000513885 583 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC093677.1-201ENST00000514414 678 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC008694.2-201ENST00000517591 306 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 OR10G5P-201ENST00000532733 358 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 MIR4472-2-201ENST00000582069 67 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.55□□□□□ -1.68
TNFSF4P23510 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF4P23510 IMMP1LP3-201ENST00000604197 224 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.55□□□□□ -1.68
TNFSF4P23510 OR6R2P-201ENST00000609216 300 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC244107.2-201ENST00000611773 76 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC073114.1-201ENST00000612027 490 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AP003400.3-201ENST00000624904 346 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.55□□□□□ -1.68
TNFSF4P23510 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
TNFSF4P23510 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TNFSF4P23510 NEAT1-202ENST00000501122 22743 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TNFSF4P23510 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
TNFSF4P23510 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms