Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL9A1P20849 AL133243.4-201ENST00000623116 3109 ntBASIC7.01□□□□□ -1.29
COL9A1P20849 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL9A1P20849 AP002364.1-201ENST00000623330 3386 ntBASIC7□□□□□ -1.29
COL9A1P20849 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC7□□□□□ -1.29
COL9A1P20849 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 AL353763.2-201ENST00000623489 1903 ntBASIC7□□□□□ -1.29
COL9A1P20849 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
COL9A1P20849 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 AC009166.2-201ENST00000624410 2833 ntBASIC7□□□□□ -1.29
COL9A1P20849 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 Y_RNA.105-201ENST00000363182 111 ntBASIC7□□□□□ -1.29
COL9A1P20849 RNU6-1017P-201ENST00000363613 106 ntBASIC7□□□□□ -1.29
COL9A1P20849 Y_RNA.170-201ENST00000363746 110 ntBASIC7□□□□□ -1.29
COL9A1P20849 RNU2-33P-201ENST00000410344 192 ntBASIC7□□□□□ -1.29
COL9A1P20849 RNU6-121P-201ENST00000410525 99 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
COL9A1P20849 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 RPS7P3-201ENST00000443360 580 ntBASIC7□□□□□ -1.29
COL9A1P20849 PRDX1P1-201ENST00000449329 596 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7□□□□□ -1.29
COL9A1P20849 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC7□□□□□ -1.29
COL9A1P20849 RBBP4P6-201ENST00000508098 202 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC107393.1-201ENST00000512403 346 ntBASIC7□□□□□ -1.29
COL9A1P20849 ZNF519P4-201ENST00000514008 125 ntBASIC7□□□□□ -1.29
COL9A1P20849 RNA5SP362-201ENST00000516048 118 ntBASIC7□□□□□ -1.29
COL9A1P20849 RNU6-911P-201ENST00000516523 104 ntBASIC7□□□□□ -1.29
COL9A1P20849 IGKV2-38-201ENST00000517443 247 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC022559.1-201ENST00000520905 205 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC087752.2-201ENST00000521219 281 ntBASIC7□□□□□ -1.29
COL9A1P20849 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7□□□□□ -1.29
COL9A1P20849 AC127381.1-201ENST00000555979 939 ntBASIC7□□□□□ -1.29
COL9A1P20849 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 AC073410.2-201ENST00000603240 332 ntBASIC7□□□□□ -1.29
COL9A1P20849 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 AC006023.2-201ENST00000609916 167 ntBASIC7□□□□□ -1.29
COL9A1P20849 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7□□□□□ -1.29
COL9A1P20849 AL450472.1-202ENST00000637286 180 ntBASIC7□□□□□ -1.29
COL9A1P20849 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7□□□□□ -1.29
COL9A1P20849 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL9A1P20849 AC026464.2-201ENST00000567834 2421 ntBASIC7□□□□□ -1.29
COL9A1P20849 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 AC116158.1-201ENST00000560231 2129 ntBASIC7□□□□□ -1.29
COL9A1P20849 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL9A1P20849 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
COL9A1P20849 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.99□□□□□ -1.29
COL9A1P20849 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL9A1P20849 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.99□□□□□ -1.29
COL9A1P20849 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
COL9A1P20849 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 Y_RNA.277-201ENST00000364754 102 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 BX276092.3-201ENST00000424182 230 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 AC073410.1-201ENST00000435125 589 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 AP000281.1-201ENST00000444036 316 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 CEACAMP6-201ENST00000452007 574 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 RN7SKP35-201ENST00000517210 151 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 OR10G5P-201ENST00000532733 358 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.99□□□□□ -1.29
COL9A1P20849 AC025423.5-201ENST00000550230 219 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.99□□□□□ -1.29
COL9A1P20849 HNRNPCP4-201ENST00000571636 900 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 AC093227.2-201ENST00000589357 285 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 AL354702.2-202ENST00000641481 890 ntBASIC6.99□□□□□ -1.29
COL9A1P20849 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
COL9A1P20849 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.99□□□□□ -1.29
COL9A1P20849 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL9A1P20849 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL9A1P20849 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.99□□□□□ -1.29
COL9A1P20849 AC005261.2-201ENST00000593427 4258 ntBASIC6.98□□□□□ -1.29
COL9A1P20849 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL9A1P20849 AC018992.1-201ENST00000523778 2149 ntBASIC6.98□□□□□ -1.29
COL9A1P20849 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL9A1P20849 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL9A1P20849 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.98□□□□□ -1.29
COL9A1P20849 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL9A1P20849 GABPAP-201ENST00000419271 1356 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms