Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MRE11P1-201ENST00000464884 2127 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 PABPC1P3-201ENST00000469174 459 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AL135752.1-201ENST00000479477 471 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 FAM206BP-201ENST00000510179 541 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 RNA5SP337-201ENST00000517007 109 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.12□□□□□ -1.43
NFKB1P19838 MRPS16P1-201ENST00000523462 412 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 COPS8P3-201ENST00000526024 482 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.12□□□□□ -1.43
NFKB1P19838 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.12□□□□□ -1.43
NFKB1P19838 HAUS8P1-201ENST00000549005 542 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.12□□□□□ -1.43
NFKB1P19838 AL049779.3-201ENST00000557141 606 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AC092332.1-201ENST00000563684 829 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NFKB1P19838 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.12□□□□□ -1.43
NFKB1P19838 FAM27E2-201ENST00000619668 403 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AL359757.2-201ENST00000624309 274 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 AP003486.1-201ENST00000525716 3994 ntBASIC6.12□□□□□ -1.43
NFKB1P19838 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
NFKB1P19838 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.12□□□□□ -1.43
NFKB1P19838 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.12□□□□□ -1.43
NFKB1P19838 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NFKB1P19838 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
NFKB1P19838 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.11□□□□□ -1.43
NFKB1P19838 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 RNY4P16-201ENST00000364768 94 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 Y_RNA.301-201ENST00000364990 103 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 GNG5P2-201ENST00000372054 207 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RPL7P60-201ENST00000397636 735 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 RPL31P52-201ENST00000407532 367 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 AP000534.2-201ENST00000412729 568 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 RPS15AP12-201ENST00000419498 388 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NFKB1P19838 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AL353662.1-201ENST00000439099 327 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RPS10P18-201ENST00000442662 495 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RPL5P7-201ENST00000444235 813 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 YRDCP3-201ENST00000456507 480 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 MTCO3P2-201ENST00000457365 171 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RPS4XP10-201ENST00000465034 731 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 HSPD1P15-201ENST00000505573 1122 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 PTP4A1P4-201ENST00000512479 322 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RN7SKP288-201ENST00000516227 268 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 RNU6-988P-201ENST00000519081 107 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.11□□□□□ -1.43
NFKB1P19838 RPL7P20-201ENST00000520308 745 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 PCNAP4-201ENST00000532690 730 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.11□□□□□ -1.43
NFKB1P19838 AC068768.2-201ENST00000602352 343 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 AC004908.2-201ENST00000609090 574 ntBASIC6.11□□□□□ -1.43
NFKB1P19838 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
NFKB1P19838 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.11□□□□□ -1.43
NFKB1P19838 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NFKB1P19838 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
NFKB1P19838 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NFKB1P19838 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.1□□□□□ -1.43
NFKB1P19838 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.1□□□□□ -1.43
NFKB1P19838 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NFKB1P19838 AP004289.2-201ENST00000444413 1457 ntBASIC6.1□□□□□ -1.43
NFKB1P19838 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NFKB1P19838 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.1□□□□□ -1.43
NFKB1P19838 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NFKB1P19838 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.1□□□□□ -1.43
NFKB1P19838 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NFKB1P19838 SNORD1C-201ENST00000363315 78 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms