Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 MIR134-201ENST00000385258 73 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 RN7SKP202-201ENST00000410439 330 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 RN7SKP159-201ENST00000410657 292 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC234782.4-201ENST00000417646 1048 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.87□□□□□ -1.79
XRCC1P18887 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.87□□□□□ -1.79
XRCC1P18887 AC073310.1-201ENST00000423226 1033 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 VN1R42P-201ENST00000424651 344 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC093422.3-201ENST00000428506 305 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.87□□□□□ -1.79
XRCC1P18887 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.87□□□□□ -1.79
XRCC1P18887 KCTD9P3-201ENST00000434597 1169 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.87□□□□□ -1.79
XRCC1P18887 RPS26P40-201ENST00000435209 294 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.87□□□□□ -1.79
XRCC1P18887 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 AC017099.1-201ENST00000448261 1028 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 RPL7P31-201ENST00000450192 724 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC106872.2-201ENST00000494303 480 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
XRCC1P18887 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
XRCC1P18887 MTND4LP31-201ENST00000514859 294 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 RNA5SP179-201ENST00000517284 121 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.87□□□□□ -1.79
XRCC1P18887 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.87□□□□□ -1.79
XRCC1P18887 COX6B1P6-201ENST00000522347 255 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
XRCC1P18887 AL136520.1-202ENST00000555494 763 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC091167.4-201ENST00000605079 184 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 AC099669.2-201ENST00000616549 437 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.87□□□□□ -1.79
XRCC1P18887 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
XRCC1P18887 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
XRCC1P18887 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
XRCC1P18887 AL049737.1-201ENST00000413920 1403 ntBASIC3.87□□□□□ -1.79
XRCC1P18887 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
XRCC1P18887 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.86□□□□□ -1.79
XRCC1P18887 MIR423-201ENST00000362201 94 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 Y_RNA.110-201ENST00000363220 99 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 RNA5SP399-201ENST00000364003 117 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
XRCC1P18887 ATP5F1P4-201ENST00000397288 746 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 SNORA11-201ENST00000408789 128 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 HMGB3P31-201ENST00000413333 595 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 AL158825.1-201ENST00000414735 521 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AL606495.1-201ENST00000422100 813 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 HIGD1AP4-201ENST00000430194 280 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 FTH1P6-201ENST00000430768 320 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 RPL6P5-201ENST00000445678 828 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.86□□□□□ -1.79
XRCC1P18887 OR9M1P-201ENST00000459641 921 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC091959.2-201ENST00000477363 321 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 NDUFA5P2-201ENST00000519723 344 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC022790.1-201ENST00000522872 204 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 OR4A2P-201ENST00000527276 913 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC104229.1-201ENST00000561364 255 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 HSPE1P5-201ENST00000561489 272 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC090751.1-201ENST00000566966 267 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC006130.2-201ENST00000586202 326 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.86□□□□□ -1.79
XRCC1P18887 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC125494.3-201ENST00000602759 455 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 STMN1P1-201ENST00000617809 440 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AL139089.1-201ENST00000620372 975 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AL161637.1-201ENST00000622380 412 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AL354798.1-201ENST00000622505 329 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC034229.5-201ENST00000624258 185 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
XRCC1P18887 AC008432.1-201ENST00000615912 1320 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 SAGE2P-201ENST00000420011 2126 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
XRCC1P18887 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
XRCC1P18887 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.86□□□□□ -1.79
XRCC1P18887 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
XRCC1P18887 AP002001.2-201ENST00000529025 1469 ntBASIC3.86□□□□□ -1.79
XRCC1P18887 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.85□□□□□ -1.79
XRCC1P18887 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
XRCC1P18887 FAM91A3P-201ENST00000456826 2544 ntBASIC3.85□□□□□ -1.79
XRCC1P18887 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
XRCC1P18887 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms