Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PTP4A1P5-201ENST00000420305 455 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.17□□□□□ -1.9
ATF1P18846 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 YY1P1-201ENST00000427625 668 ntBASIC3.17□□□□□ -1.9
ATF1P18846 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AL645931.1-201ENST00000439737 410 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 TXNP1-201ENST00000441872 371 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.17□□□□□ -1.9
ATF1P18846 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
ATF1P18846 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 AC010468.1-201ENST00000461022 817 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC078817.1-201ENST00000492623 435 ntBASIC3.17□□□□□ -1.9
ATF1P18846 TPT1P3-201ENST00000492841 512 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC020893.1-201ENST00000502452 580 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.17□□□□□ -1.9
ATF1P18846 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
ATF1P18846 RNU6-352P-201ENST00000516908 107 ntBASIC3.17□□□□□ -1.9
ATF1P18846 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 AC104997.1-201ENST00000519761 717 ntBASIC3.17□□□□□ -1.9
ATF1P18846 IGKV2-36-201ENST00000519999 223 ntBASIC3.17□□□□□ -1.9
ATF1P18846 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 AC008676.3-201ENST00000521237 435 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.17□□□□□ -1.9
ATF1P18846 AP001636.2-201ENST00000525517 696 ntBASIC3.17□□□□□ -1.9
ATF1P18846 OR7E13P-201ENST00000526052 910 ntBASIC3.17□□□□□ -1.9
ATF1P18846 CYCSP30-201ENST00000546447 172 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC023161.2-201ENST00000551218 780 ntBASIC3.17□□□□□ -1.9
ATF1P18846 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.17□□□□□ -1.9
ATF1P18846 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.17□□□□□ -1.9
ATF1P18846 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 MIR6758-201ENST00000620653 63 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AC022149.2-201ENST00000621061 203 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AL357559.1-201ENST00000622228 274 ntBASIC3.17□□□□□ -1.9
ATF1P18846 FP236240.3-201ENST00000623061 327 ntBASIC3.17□□□□□ -1.9
ATF1P18846 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
ATF1P18846 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ATF1P18846 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF1P18846 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
ATF1P18846 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF1P18846 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 RPL32P3-201ENST00000359025 275 ntBASIC3.16□□□□□ -1.9
ATF1P18846 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ATF1P18846 MIR372-201ENST00000362225 67 ntBASIC3.16□□□□□ -1.9
ATF1P18846 SNORA56-201ENST00000383966 129 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AL807761.1-201ENST00000417622 171 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 RPL17P36-201ENST00000420302 549 ntBASIC3.16□□□□□ -1.9
ATF1P18846 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AL606490.8-201ENST00000441624 319 ntBASIC3.16□□□□□ -1.9
ATF1P18846 RPL21P89-201ENST00000444021 467 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 RPS3AP46-201ENST00000448352 682 ntBASIC3.16□□□□□ -1.9
ATF1P18846 TVP23BP2-201ENST00000455082 615 ntBASIC3.16□□□□□ -1.9
ATF1P18846 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 CYCSP20-201ENST00000473154 315 ntBASIC3.16□□□□□ -1.9
ATF1P18846 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF1P18846 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATF1P18846 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AC016550.3-201ENST00000515706 767 ntBASIC3.16□□□□□ -1.9
ATF1P18846 RN7SKP234-201ENST00000517173 224 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF1P18846 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 AP002812.4-201ENST00000532139 286 ntBASIC3.16□□□□□ -1.9
ATF1P18846 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF1P18846 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AL389895.1-201ENST00000554127 252 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC009268.1-201ENST00000561352 1203 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF1P18846 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.16□□□□□ -1.9
ATF1P18846 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF1P18846 AC005344.1-201ENST00000613391 459 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC245389.2-201ENST00000616023 576 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC243756.2-201ENST00000618406 463 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC242843.1-201ENST00000618702 573 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AC092628.2-201ENST00000622492 339 ntBASIC3.16□□□□□ -1.9
ATF1P18846 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF1P18846 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF1P18846 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms