Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RMST_8.1-201ENST00000610287 165 ntBASIC2.7□□□□□ -1.98
CCL3L1P16619 MIR8058-201ENST00000615737 89 ntBASIC2.7□□□□□ -1.98
CCL3L1P16619 AC067852.7-201ENST00000623270 535 ntBASIC2.7□□□□□ -1.98
CCL3L1P16619 AC004777.1-201ENST00000624317 287 ntBASIC2.7□□□□□ -1.98
CCL3L1P16619 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.7□□□□□ -1.98
CCL3L1P16619 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.7□□□□□ -1.98
CCL3L1P16619 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.7□□□□□ -1.98
CCL3L1P16619 AL133383.2-201ENST00000622958 2336 ntBASIC2.7□□□□□ -1.98
CCL3L1P16619 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.7□□□□□ -1.98
CCL3L1P16619 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.7□□□□□ -1.98
CCL3L1P16619 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCL3L1P16619 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCL3L1P16619 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.69□□□□□ -1.98
CCL3L1P16619 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 RNU6-1263P-201ENST00000384601 106 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 Z98941.1-201ENST00000407764 100 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 RN7SKP285-201ENST00000410137 318 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 GLRXP1-201ENST00000423261 334 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.69□□□□□ -1.98
CCL3L1P16619 AL451062.2-201ENST00000427515 271 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.69□□□□□ -1.98
CCL3L1P16619 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.69□□□□□ -1.98
CCL3L1P16619 AP000936.3-201ENST00000438127 255 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 HMGB3P11-201ENST00000440127 604 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 ATP5C1P1-201ENST00000441945 895 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC099063.2-201ENST00000446360 662 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 NDUFS5P3-201ENST00000450668 321 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 HMGN1P18-201ENST00000457642 277 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC010401.1-201ENST00000463867 348 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC091153.1-201ENST00000466297 402 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC034236.1-201ENST00000469891 373 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 RPL7L1P8-201ENST00000469911 741 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.69□□□□□ -1.98
CCL3L1P16619 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.69□□□□□ -1.98
CCL3L1P16619 HIGD1AP1-201ENST00000550979 275 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.69□□□□□ -1.98
CCL3L1P16619 AC005412.1-201ENST00000580812 1049 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 SRGNP1-201ENST00000603392 451 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AL139286.1-201ENST00000604465 483 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AC067838.1-201ENST00000606064 577 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 AL157817.1-201ENST00000614264 790 ntBASIC2.69□□□□□ -1.98
CCL3L1P16619 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
CCL3L1P16619 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCL3L1P16619 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
CCL3L1P16619 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCL3L1P16619 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCL3L1P16619 RNA5SP267-201ENST00000364893 126 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AL357075.1-201ENST00000404107 726 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AL138878.1-201ENST00000405131 347 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 RNA5SP44-201ENST00000410446 133 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AMD1P2-201ENST00000412936 992 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 FAR1P1-201ENST00000427163 934 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AC005326.1-201ENST00000429197 123 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AC091862.1-201ENST00000438016 1100 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.68□□□□□ -1.98
CCL3L1P16619 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.68□□□□□ -1.98
CCL3L1P16619 RN7SKP5-201ENST00000517045 272 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 RPL21P12-201ENST00000559810 515 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.68□□□□□ -1.98
CCL3L1P16619 CKS1BP3-201ENST00000600888 237 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AC073657.2-201ENST00000605661 303 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 AC009464.1-201ENST00000615731 469 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 MTND4P10-201ENST00000446199 1363 ntBASIC2.68□□□□□ -1.98
CCL3L1P16619 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.68□□□□□ -1.98
CCL3L1P16619 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCL3L1P16619 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.68□□□□□ -1.98
CCL3L1P16619 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.67□□□□□ -1.98
CCL3L1P16619 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms