Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CFTRP13569 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.51□□□□□ -1.53
CFTRP13569 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CFTRP13569 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CFTRP13569 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CFTRP13569 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.51□□□□□ -1.53
CFTRP13569 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.51□□□□□ -1.53
CFTRP13569 AC005229.2-201ENST00000456995 399 ntBASIC5.51□□□□□ -1.53
CFTRP13569 MIR4319-201ENST00000577285 85 ntBASIC5.51□□□□□ -1.53
CFTRP13569 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.51□□□□□ -1.53
CFTRP13569 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.51□□□□□ -1.53
CFTRP13569 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.51□□□□□ -1.53
CFTRP13569 AL049840.6-202ENST00000603373 279 ntBASIC5.51□□□□□ -1.53
CFTRP13569 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CFTRP13569 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.5□□□□□ -1.53
CFTRP13569 AC017071.1-201ENST00000564407 2204 ntBASIC5.5□□□□□ -1.53
CFTRP13569 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.5□□□□□ -1.53
CFTRP13569 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.5□□□□□ -1.53
CFTRP13569 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.5□□□□□ -1.53
CFTRP13569 AC106785.3-201ENST00000564064 847 ntBASIC5.5□□□□□ -1.53
CFTRP13569 AC104984.5-201ENST00000586878 94 ntBASIC5.5□□□□□ -1.53
CFTRP13569 ATP1B3P1-201ENST00000605365 821 ntBASIC5.5□□□□□ -1.53
CFTRP13569 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CFTRP13569 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.5□□□□□ -1.53
CFTRP13569 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CFTRP13569 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.49□□□□□ -1.53
CFTRP13569 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.49□□□□□ -1.53
CFTRP13569 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CFTRP13569 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CFTRP13569 AC005183.1-201ENST00000603687 1979 ntBASIC5.49□□□□□ -1.53
CFTRP13569 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.49□□□□□ -1.53
CFTRP13569 AC073325.2-201ENST00000339545 159 ntBASIC5.49□□□□□ -1.53
CFTRP13569 EEF1A1P41-201ENST00000414667 207 ntBASIC5.49□□□□□ -1.53
CFTRP13569 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.49□□□□□ -1.53
CFTRP13569 FTLP19-201ENST00000433300 394 ntBASIC5.49□□□□□ -1.53
CFTRP13569 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.49□□□□□ -1.53
CFTRP13569 RPL32P28-201ENST00000443577 397 ntBASIC5.49□□□□□ -1.53
CFTRP13569 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.49□□□□□ -1.53
CFTRP13569 RPS3AP50-201ENST00000487064 803 ntBASIC5.49□□□□□ -1.53
CFTRP13569 AC068724.1-201ENST00000487100 792 ntBASIC5.49□□□□□ -1.53
CFTRP13569 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.49□□□□□ -1.53
CFTRP13569 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CFTRP13569 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CFTRP13569 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.48□□□□□ -1.53
CFTRP13569 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.48□□□□□ -1.53
CFTRP13569 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CFTRP13569 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CFTRP13569 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CFTRP13569 AC093156.1-201ENST00000440382 670 ntBASIC5.48□□□□□ -1.53
CFTRP13569 AC069540.1-201ENST00000446320 988 ntBASIC5.48□□□□□ -1.53
CFTRP13569 NPM1P13-201ENST00000452663 865 ntBASIC5.48□□□□□ -1.53
CFTRP13569 AC093755.1-201ENST00000512950 1023 ntBASIC5.48□□□□□ -1.53
CFTRP13569 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.48□□□□□ -1.53
CFTRP13569 AC008638.3-201ENST00000603341 463 ntBASIC5.48□□□□□ -1.53
CFTRP13569 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CFTRP13569 THAP12P8-201ENST00000447914 2115 ntBASIC5.48□□□□□ -1.53
CFTRP13569 AL031595.2-201ENST00000624215 19071 ntBASIC5.47□□□□□ -1.53
CFTRP13569 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CFTRP13569 RPL23AP82-202ENST00000427528 469 ntBASIC5.47□□□□□ -1.53
CFTRP13569 AC108938.1-201ENST00000451204 136 ntBASIC5.47□□□□□ -1.53
CFTRP13569 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.47□□□□□ -1.53
CFTRP13569 CENPBD1P1-201ENST00000464061 469 ntBASIC5.47□□□□□ -1.53
CFTRP13569 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CFTRP13569 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.47□□□□□ -1.53
CFTRP13569 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CFTRP13569 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.47□□□□□ -1.53
CFTRP13569 RNU4-82P-201ENST00000362443 140 ntBASIC5.46□□□□□ -1.53
CFTRP13569 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.46□□□□□ -1.53
CFTRP13569 AF228730.2-201ENST00000438784 848 ntBASIC5.46□□□□□ -1.53
CFTRP13569 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.46□□□□□ -1.53
CFTRP13569 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.46□□□□□ -1.53
CFTRP13569 RN7SL432P-201ENST00000484057 298 ntBASIC5.46□□□□□ -1.53
CFTRP13569 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.46□□□□□ -1.53
CFTRP13569 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.46□□□□□ -1.53
CFTRP13569 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.53
CFTRP13569 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.46□□□□□ -1.53
CFTRP13569 AC015917.1-201ENST00000579654 510 ntBASIC5.46□□□□□ -1.53
CFTRP13569 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CFTRP13569 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CFTRP13569 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
CFTRP13569 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.46□□□□□ -1.54
CFTRP13569 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.46□□□□□ -1.54
CFTRP13569 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CFTRP13569 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CFTRP13569 AC126124.2-201ENST00000413542 321 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AC016696.1-201ENST00000446949 318 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL109933.2-201ENST00000452651 260 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AC026782.2-201ENST00000510845 636 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.45□□□□□ -1.54
CFTRP13569 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.45□□□□□ -1.54
CFTRP13569 AC006363.1-201ENST00000603806 463 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AC009948.4-201ENST00000604692 675 ntBASIC5.45□□□□□ -1.54
CFTRP13569 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CFTRP13569 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CFTRP13569 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CFTRP13569 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.45□□□□□ -1.54
CFTRP13569 RPSAP41-201ENST00000439695 860 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.45□□□□□ -1.54
CFTRP13569 RN7SKP116-201ENST00000516902 319 ntBASIC5.45□□□□□ -1.54
CFTRP13569 AL157394.1-201ENST00000562983 1224 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms