Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCNAP12004 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.42□□□□□ -1.7
PCNAP12004 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.42□□□□□ -1.7
PCNAP12004 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
PCNAP12004 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 RNU5D-1-201ENST00000363299 116 ntBASIC4.42□□□□□ -1.7
PCNAP12004 MIR550A3-201ENST00000390735 95 ntBASIC4.42□□□□□ -1.7
PCNAP12004 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
PCNAP12004 RPL31P52-201ENST00000407532 367 ntBASIC4.42□□□□□ -1.7
PCNAP12004 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.42□□□□□ -1.7
PCNAP12004 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.42□□□□□ -1.7
PCNAP12004 AL031736.2-201ENST00000426573 787 ntBASIC4.42□□□□□ -1.7
PCNAP12004 RPS12P10-201ENST00000427031 377 ntBASIC4.42□□□□□ -1.7
PCNAP12004 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 MTND1P32-201ENST00000433043 938 ntBASIC4.42□□□□□ -1.7
PCNAP12004 AL008629.1-201ENST00000438615 184 ntBASIC4.42□□□□□ -1.7
PCNAP12004 RPS27AP15-201ENST00000447672 466 ntBASIC4.42□□□□□ -1.7
PCNAP12004 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 AC092324.1-201ENST00000468671 324 ntBASIC4.42□□□□□ -1.7
PCNAP12004 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.42□□□□□ -1.7
PCNAP12004 AC010486.2-201ENST00000505572 483 ntBASIC4.42□□□□□ -1.7
PCNAP12004 AC135352.1-201ENST00000506173 1418 ntBASIC4.42□□□□□ -1.7
PCNAP12004 OR51K1P-201ENST00000510214 950 ntBASIC4.42□□□□□ -1.7
PCNAP12004 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.42□□□□□ -1.7
PCNAP12004 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 MTND2P26-201ENST00000528255 1029 ntBASIC4.42□□□□□ -1.7
PCNAP12004 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.42□□□□□ -1.7
PCNAP12004 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.42□□□□□ -1.7
PCNAP12004 EIF5A2P1-201ENST00000564027 460 ntBASIC4.42□□□□□ -1.7
PCNAP12004 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.42□□□□□ -1.7
PCNAP12004 NF1P5-201ENST00000588287 448 ntBASIC4.42□□□□□ -1.7
PCNAP12004 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.42□□□□□ -1.7
PCNAP12004 BNIP3P26-201ENST00000600827 554 ntBASIC4.42□□□□□ -1.7
PCNAP12004 AL139286.1-201ENST00000604465 483 ntBASIC4.42□□□□□ -1.7
PCNAP12004 AL354760.1-201ENST00000608357 643 ntBASIC4.42□□□□□ -1.7
PCNAP12004 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
PCNAP12004 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.42□□□□□ -1.7
PCNAP12004 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 AC116618.1-201ENST00000634617 774 ntBASIC4.42□□□□□ -1.7
PCNAP12004 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PCNAP12004 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
PCNAP12004 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCNAP12004 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.41□□□□□ -1.7
PCNAP12004 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
PCNAP12004 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 AC017104.4-201ENST00000636283 1592 ntBASIC4.41□□□□□ -1.7
PCNAP12004 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCNAP12004 AC025125.1-201ENST00000624743 1922 ntBASIC4.41□□□□□ -1.7
PCNAP12004 FAM3C2-201ENST00000312214 681 ntBASIC4.41□□□□□ -1.7
PCNAP12004 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCNAP12004 Y_RNA.169-201ENST00000363745 96 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RN7SKP103-201ENST00000363848 320 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RNU6-157P-201ENST00000383957 107 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RSL24D1P4-201ENST00000400938 484 ntBASIC4.41□□□□□ -1.7
PCNAP12004 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCNAP12004 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 RNU6-757P-201ENST00000410334 100 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RNA5SP104-201ENST00000410989 118 ntBASIC4.41□□□□□ -1.7
PCNAP12004 FCF1P2-201ENST00000415284 583 ntBASIC4.41□□□□□ -1.7
PCNAP12004 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AC006960.1-201ENST00000419980 153 ntBASIC4.41□□□□□ -1.7
PCNAP12004 PTP4A1P5-201ENST00000420305 455 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC011233.1-201ENST00000422812 283 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 RPP40P1-201ENST00000426762 456 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 MTND3P1-201ENST00000441336 220 ntBASIC4.41□□□□□ -1.7
PCNAP12004 SETD6P1-201ENST00000444575 317 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.41□□□□□ -1.7
PCNAP12004 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.41□□□□□ -1.7
PCNAP12004 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 Z99714.1-201ENST00000450463 807 ntBASIC4.41□□□□□ -1.7
PCNAP12004 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.41□□□□□ -1.7
PCNAP12004 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 NDUFA5P7-201ENST00000452914 242 ntBASIC4.41□□□□□ -1.7
PCNAP12004 ISCUP1-201ENST00000454451 448 ntBASIC4.41□□□□□ -1.7
PCNAP12004 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 RPL21P71-201ENST00000465598 459 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC006967.1-201ENST00000467608 589 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.41□□□□□ -1.7
PCNAP12004 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
PCNAP12004 MTCYBP16-201ENST00000509187 1129 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AC005351.1-201ENST00000511152 786 ntBASIC4.41□□□□□ -1.7
PCNAP12004 RNU6-1225P-201ENST00000516336 65 ntBASIC4.41□□□□□ -1.7
PCNAP12004 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.41□□□□□ -1.7
PCNAP12004 AC005832.3-201ENST00000537929 631 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms