Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU1-95P-201ENST00000516357 160 ntBASIC4.24□□□□□ -1.73
VTNP04004 RNU1-128P-201ENST00000516704 160 ntBASIC4.24□□□□□ -1.73
VTNP04004 PAICSP4-201ENST00000517543 1253 ntBASIC4.24□□□□□ -1.73
VTNP04004 AC021451.1-201ENST00000523498 1129 ntBASIC4.24□□□□□ -1.73
VTNP04004 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTNP04004 AC022882.1-201ENST00000532142 501 ntBASIC4.24□□□□□ -1.73
VTNP04004 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTNP04004 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.24□□□□□ -1.73
VTNP04004 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.24□□□□□ -1.73
VTNP04004 AC018552.3-201ENST00000567416 561 ntBASIC4.24□□□□□ -1.73
VTNP04004 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.24□□□□□ -1.73
VTNP04004 RN7SL339P-201ENST00000580597 296 ntBASIC4.24□□□□□ -1.73
VTNP04004 RPAP2P1-201ENST00000603626 1168 ntBASIC4.24□□□□□ -1.73
VTNP04004 AC099785.1-201ENST00000605697 437 ntBASIC4.24□□□□□ -1.73
VTNP04004 AC034229.4-201ENST00000607861 441 ntBASIC4.24□□□□□ -1.73
VTNP04004 AL391497.1-201ENST00000608671 547 ntBASIC4.24□□□□□ -1.73
VTNP04004 MIR6075-201ENST00000620782 95 ntBASIC4.24□□□□□ -1.73
VTNP04004 AC024023.1-201ENST00000624530 922 ntBASIC4.24□□□□□ -1.73
VTNP04004 AL451142.2-201ENST00000429076 2090 ntBASIC4.24□□□□□ -1.73
VTNP04004 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VTNP04004 ZNF962P-201ENST00000443465 3140 ntBASIC4.24□□□□□ -1.73
VTNP04004 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VTNP04004 BTBD10P1-201ENST00000549824 1352 ntBASIC4.24□□□□□ -1.73
VTNP04004 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VTNP04004 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
VTNP04004 AC011266.1-201ENST00000624119 3569 ntBASIC4.23□□□□□ -1.73
VTNP04004 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.23□□□□□ -1.73
VTNP04004 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTNP04004 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VTNP04004 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VTNP04004 AC106754.1-201ENST00000562632 1513 ntBASIC4.23□□□□□ -1.73
VTNP04004 SNORA62.2-201ENST00000364672 152 ntBASIC4.23□□□□□ -1.73
VTNP04004 SNORA5A-201ENST00000384111 134 ntBASIC4.23□□□□□ -1.73
VTNP04004 U6.112-201ENST00000384129 70 ntBASIC4.23□□□□□ -1.73
VTNP04004 MIR92A2-201ENST00000385299 75 ntBASIC4.23□□□□□ -1.73
VTNP04004 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.23□□□□□ -1.73
VTNP04004 RPL21P17-201ENST00000397467 475 ntBASIC4.23□□□□□ -1.73
VTNP04004 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.23□□□□□ -1.73
VTNP04004 HMGB3P18-201ENST00000406327 590 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC013404.1-201ENST00000413068 249 ntBASIC4.23□□□□□ -1.73
VTNP04004 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.23□□□□□ -1.73
VTNP04004 TCEA1P2-201ENST00000420496 906 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC092647.1-201ENST00000420654 287 ntBASIC4.23□□□□□ -1.73
VTNP04004 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.23□□□□□ -1.73
VTNP04004 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.23□□□□□ -1.73
VTNP04004 EIF4A1P11-201ENST00000451239 222 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 SNORA19.3-201ENST00000516165 130 ntBASIC4.23□□□□□ -1.73
VTNP04004 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 OR5AK3P-201ENST00000527486 1297 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 AC025260.1-201ENST00000548858 430 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.23□□□□□ -1.73
VTNP04004 MIR4789-201ENST00000577469 82 ntBASIC4.23□□□□□ -1.73
VTNP04004 MIR4760-201ENST00000585040 80 ntBASIC4.23□□□□□ -1.73
VTNP04004 RN7SL622P-201ENST00000585292 275 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC091057.3-201ENST00000602684 733 ntBASIC4.23□□□□□ -1.73
VTNP04004 AL050303.3-201ENST00000613704 284 ntBASIC4.23□□□□□ -1.73
VTNP04004 MIR7973-1-201ENST00000614683 76 ntBASIC4.23□□□□□ -1.73
VTNP04004 AC023510.2-201ENST00000622162 746 ntBASIC4.23□□□□□ -1.73
VTNP04004 OR4G3P-201ENST00000633500 913 ntBASIC4.23□□□□□ -1.73
VTNP04004 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
VTNP04004 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VTNP04004 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VTNP04004 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.23□□□□□ -1.73
VTNP04004 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VTNP04004 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.22□□□□□ -1.73
VTNP04004 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VTNP04004 RNA5SP27-201ENST00000363839 119 ntBASIC4.22□□□□□ -1.73
VTNP04004 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
VTNP04004 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VTNP04004 RNU6-298P-201ENST00000390888 96 ntBASIC4.22□□□□□ -1.73
VTNP04004 AL603865.2-201ENST00000401679 213 ntBASIC4.22□□□□□ -1.73
VTNP04004 UBE2V1P9-201ENST00000414760 368 ntBASIC4.22□□□□□ -1.73
VTNP04004 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.22□□□□□ -1.73
VTNP04004 AC114973.1-201ENST00000429057 632 ntBASIC4.22□□□□□ -1.73
VTNP04004 ETF1P3-201ENST00000430422 1160 ntBASIC4.22□□□□□ -1.73
VTNP04004 AC091286.1-201ENST00000431233 461 ntBASIC4.22□□□□□ -1.73
VTNP04004 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.22□□□□□ -1.73
VTNP04004 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.22□□□□□ -1.73
VTNP04004 AL353093.1-201ENST00000441292 436 ntBASIC4.22□□□□□ -1.73
VTNP04004 AL606517.1-201ENST00000446914 387 ntBASIC4.22□□□□□ -1.73
VTNP04004 RPS17P13-201ENST00000448974 407 ntBASIC4.22□□□□□ -1.73
VTNP04004 AC008280.2-201ENST00000455473 307 ntBASIC4.22□□□□□ -1.73
VTNP04004 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.22□□□□□ -1.73
VTNP04004 snoU109.3-201ENST00000459477 145 ntBASIC4.22□□□□□ -1.73
VTNP04004 AL133162.1-201ENST00000463228 453 ntBASIC4.22□□□□□ -1.73
VTNP04004 AC022034.3-201ENST00000471393 478 ntBASIC4.22□□□□□ -1.73
VTNP04004 RPS4XP6-201ENST00000477670 797 ntBASIC4.22□□□□□ -1.73
VTNP04004 RPL7P24-201ENST00000493052 752 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms