Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 SNORA44-201ENST00000384584 132 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 RPL21P112-201ENST00000434403 463 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 SNRPCP3-201ENST00000474888 476 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 TRBV12-2-201ENST00000489763 344 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 MORF4L2P1-201ENST00000503761 858 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.07□□□□□ -1.92
SPTA1P02549 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SPTA1P02549 KLKP1-201ENST00000595979 403 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 EIF1P6-201ENST00000600054 334 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.06□□□□□ -1.92
SPTA1P02549 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SPTA1P02549 OR51A6P-201ENST00000418680 1004 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 ISCA1P6-201ENST00000427740 390 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.06□□□□□ -1.92
SPTA1P02549 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.06□□□□□ -1.92
SPTA1P02549 AC019227.1-201ENST00000526902 510 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 AC078814.3-201ENST00000553036 491 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 AC124856.1-201ENST00000600819 896 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 RNVU1-4-201ENST00000612985 164 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.06□□□□□ -1.92
SPTA1P02549 AC064859.1-201ENST00000624741 174 ntBASIC3.06□□□□□ -1.92
SPTA1P02549 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.06□□□□□ -1.92
SPTA1P02549 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SPTA1P02549 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SPTA1P02549 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPTA1P02549 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
SPTA1P02549 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SPTA1P02549 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 Y_RNA.40-201ENST00000362645 93 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 HCFC2P1-201ENST00000392864 1592 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SPTA1P02549 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SPTA1P02549 RNA5SP229-201ENST00000410809 99 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 HLA-N-201ENST00000437516 135 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC112492.1-201ENST00000449607 712 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.05□□□□□ -1.92
SPTA1P02549 SEPT7P6-201ENST00000469999 1143 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 RPS3AP43-201ENST00000479743 781 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 DEFB109F-201ENST00000491870 277 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.05□□□□□ -1.92
SPTA1P02549 AC103710.3-201ENST00000608157 948 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 AC138965.3-201ENST00000623875 498 ntBASIC3.05□□□□□ -1.92
SPTA1P02549 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.05□□□□□ -1.92
SPTA1P02549 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
SPTA1P02549 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SPTA1P02549 AL136131.1-201ENST00000406079 803 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC073069.1-201ENST00000428657 441 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 ARL4AP3-201ENST00000441452 574 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 HMGB1P5-202ENST00000451497 985 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 RPL7P48-201ENST00000461513 746 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 ATP5F1P7-201ENST00000567330 760 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 MIR4425-201ENST00000580572 84 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC231759.1-201ENST00000616455 597 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SPTA1P02549 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.04□□□□□ -1.92
SPTA1P02549 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.04□□□□□ -1.92
SPTA1P02549 RN7SL594P-201ENST00000470590 287 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC109458.1-201ENST00000508858 316 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC021755.1-201ENST00000559747 1447 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC106734.1-201ENST00000568646 663 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.04□□□□□ -1.92
SPTA1P02549 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.04□□□□□ -1.92
SPTA1P02549 MRPS35P3-201ENST00000603189 709 ntBASIC3.04□□□□□ -1.92
SPTA1P02549 AC006946.3-201ENST00000609791 756 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms