Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
COL4A1P02462 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A1P02462 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A1P02462 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A1P02462 MTND6P5-201ENST00000448266 512 ntBASIC3.89□□□□□ -1.79
COL4A1P02462 ASNSP4-201ENST00000511103 447 ntBASIC3.89□□□□□ -1.79
COL4A1P02462 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A1P02462 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A1P02462 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.89□□□□□ -1.79
COL4A1P02462 AC006023.1-201ENST00000603944 259 ntBASIC3.89□□□□□ -1.79
COL4A1P02462 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.89□□□□□ -1.79
COL4A1P02462 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.89□□□□□ -1.79
COL4A1P02462 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A1P02462 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
COL4A1P02462 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A1P02462 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A1P02462 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A1P02462 MTND4P26-201ENST00000415971 1359 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 AC012065.2-201ENST00000421295 375 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 AC006028.1-201ENST00000438379 402 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 TRBV8-2-201ENST00000475637 270 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 AC069306.1-201ENST00000507006 843 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 AC107934.2-201ENST00000518653 310 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 NDUFB9P3-201ENST00000521269 501 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.88□□□□□ -1.79
COL4A1P02462 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A1P02462 MIR4513-201ENST00000581077 86 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COL4A1P02462 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A1P02462 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
COL4A1P02462 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.88□□□□□ -1.79
COL4A1P02462 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A1P02462 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL4A1P02462 AC108206.1-201ENST00000570186 4159 ntBASIC3.88□□□□□ -1.79
COL4A1P02462 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 RNA5SP80-201ENST00000410475 111 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A1P02462 HMGB1P16-201ENST00000447155 540 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 MTCO3P16-201ENST00000454456 754 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 DNAJC19P1-201ENST00000455312 319 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC008481.1-201ENST00000463278 396 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 RPL21P8-201ENST00000465083 535 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC010307.1-201ENST00000467206 836 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 SYT14P1-201ENST00000481459 721 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 PRELID3BP6-201ENST00000503839 571 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A1P02462 AC015917.1-201ENST00000579654 510 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A1P02462 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A1P02462 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A1P02462 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A1P02462 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL4A1P02462 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL4A1P02462 MTND4LP20-201ENST00000402379 270 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 COTL1P1-201ENST00000422309 375 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AL135938.1-201ENST00000443141 297 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.87□□□□□ -1.79
COL4A1P02462 HMGB1P5-202ENST00000451497 985 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.87□□□□□ -1.79
COL4A1P02462 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.87□□□□□ -1.79
COL4A1P02462 AL034351.1-201ENST00000605288 668 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC015849.2-201ENST00000605738 409 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 AC090971.4-201ENST00000560291 1800 ntBASIC3.87□□□□□ -1.79
COL4A1P02462 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL4A1P02462 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.87□□□□□ -1.79
COL4A1P02462 AC017071.1-201ENST00000564407 2204 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
COL4A1P02462 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A1P02462 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
COL4A1P02462 AL672296.1-201ENST00000427780 2158 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AC062016.1-201ENST00000355719 319 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
COL4A1P02462 SNORA18.3-201ENST00000384122 132 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AL138885.1-201ENST00000405921 675 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.86□□□□□ -1.79
COL4A1P02462 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.86□□□□□ -1.79
COL4A1P02462 AL513175.1-201ENST00000431492 780 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A1P02462 AC092447.2-201ENST00000435487 669 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AC117440.1-201ENST00000474107 571 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.86□□□□□ -1.79
COL4A1P02462 HMGB1P19-201ENST00000517578 577 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A1P02462 AC022080.3-201ENST00000544433 482 ntBASIC3.86□□□□□ -1.79
COL4A1P02462 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.86□□□□□ -1.79
COL4A1P02462 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A1P02462 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL4A1P02462 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
COL4A1P02462 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
COL4A1P02462 AL513174.1-201ENST00000423182 629 ntBASIC3.85□□□□□ -1.79
COL4A1P02462 AC016696.1-201ENST00000446949 318 ntBASIC3.85□□□□□ -1.79
COL4A1P02462 AC006504.3-201ENST00000586818 523 ntBASIC3.85□□□□□ -1.79
COL4A1P02462 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.85□□□□□ -1.79
COL4A1P02462 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms