Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 RN7SKP177-201ENST00000410567 355 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 RNU4-6P-201ENST00000410804 122 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 MORF4L1P7-201ENST00000426038 703 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 NPM1P24-201ENST00000428039 894 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 ISCA1P2-201ENST00000438679 421 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 MED6P1-201ENST00000439659 713 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL645931.1-201ENST00000439737 410 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC110792.1-201ENST00000491826 472 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 RNA5SP164-201ENST00000516533 110 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 TRAV15-201ENST00000556680 249 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 CBX3P2-202ENST00000583365 535 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL096803.3-201ENST00000609032 532 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC116651.1-201ENST00000609724 556 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AL118556.2-201ENST00000614375 824 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC123768.4-201ENST00000616244 701 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC090506.2-201ENST00000624521 419 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 AC006042.3-201ENST00000454684 1469 ntBASIC3.13□□□□□ -1.91
HLA-DQB1P01920 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DQB1P01920 MTND4P21-201ENST00000453886 1357 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 SNORD115-48-201ENST00000364764 76 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 RNU6-452P-201ENST00000384406 107 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 USP9YP31-201ENST00000431405 881 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 MTND4LP7-201ENST00000431728 294 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 CBX1P4-201ENST00000439415 457 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 MTCO3P43-201ENST00000440974 771 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 RPL23AP62-201ENST00000463396 453 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 CABYRP1-201ENST00000465493 1045 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 RN7SL459P-201ENST00000481078 302 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AP000563.1-201ENST00000490865 758 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC022695.1-201ENST00000522089 237 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 CKS1BP1-201ENST00000555221 240 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC011477.5-201ENST00000586571 259 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC008745.1-201ENST00000604064 271 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AC090525.3-201ENST00000605601 189 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AL354696.1-201ENST00000614652 497 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
HLA-DQB1P01920 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DQB1P01920 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB1P01920 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB1P01920 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DQB1P01920 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
HLA-DQB1P01920 U3.11-201ENST00000364476 212 ntBASIC3.11□□□□□ -1.91
HLA-DQB1P01920 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms