Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFP01375 AC093698.1-201ENST00000423843 571 ntBASIC3.33□□□□□ -1.88
TNFP01375 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 AC006028.1-201ENST00000438379 402 ntBASIC3.33□□□□□ -1.88
TNFP01375 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 AL645939.1-201ENST00000453429 797 ntBASIC3.33□□□□□ -1.88
TNFP01375 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.33□□□□□ -1.88
TNFP01375 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.33□□□□□ -1.88
TNFP01375 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFP01375 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
TNFP01375 RN7SKP34-201ENST00000516142 244 ntBASIC3.33□□□□□ -1.88
TNFP01375 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 AC091515.1-201ENST00000548110 679 ntBASIC3.33□□□□□ -1.88
TNFP01375 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFP01375 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.33□□□□□ -1.88
TNFP01375 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFP01375 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 AC007529.1-201ENST00000418574 2178 ntBASIC3.33□□□□□ -1.88
TNFP01375 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFP01375 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFP01375 CR381670.1-201ENST00000624291 1693 ntBASIC3.33□□□□□ -1.88
TNFP01375 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.33□□□□□ -1.88
TNFP01375 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFP01375 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TNFP01375 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFP01375 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 RPL21P71-201ENST00000465598 459 ntBASIC3.32□□□□□ -1.88
TNFP01375 AC017015.1-201ENST00000477387 286 ntBASIC3.32□□□□□ -1.88
TNFP01375 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
TNFP01375 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
TNFP01375 RN7SKP57-201ENST00000517248 293 ntBASIC3.32□□□□□ -1.88
TNFP01375 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.32□□□□□ -1.88
TNFP01375 MIR3200-201ENST00000580767 85 ntBASIC3.32□□□□□ -1.88
TNFP01375 VN1R79P-201ENST00000593540 513 ntBASIC3.32□□□□□ -1.88
TNFP01375 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.32□□□□□ -1.88
TNFP01375 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
TNFP01375 AL159169.2-201ENST00000610061 1269 ntBASIC3.32□□□□□ -1.88
TNFP01375 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 MTND4P10-201ENST00000446199 1363 ntBASIC3.32□□□□□ -1.88
TNFP01375 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFP01375 AL451142.2-201ENST00000429076 2090 ntBASIC3.32□□□□□ -1.88
TNFP01375 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AC073073.2-201ENST00000609827 2578 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC119744.1-201ENST00000454746 1715 ntBASIC3.31□□□□□ -1.88
TNFP01375 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 AC024341.1-201ENST00000526444 1552 ntBASIC3.31□□□□□ -1.88
TNFP01375 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TNFP01375 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TNFP01375 MIR423-201ENST00000362201 94 ntBASIC3.31□□□□□ -1.88
TNFP01375 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.31□□□□□ -1.88
TNFP01375 HMGN1P24-201ENST00000412282 298 ntBASIC3.31□□□□□ -1.88
TNFP01375 Z99755.1-201ENST00000414048 380 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC008280.1-201ENST00000418851 412 ntBASIC3.31□□□□□ -1.88
TNFP01375 OR6K4P-201ENST00000423179 955 ntBASIC3.31□□□□□ -1.88
TNFP01375 AL365396.1-201ENST00000430854 671 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFP01375 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
TNFP01375 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
TNFP01375 AP000926.1-201ENST00000479573 241 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC110794.1-201ENST00000505816 425 ntBASIC3.31□□□□□ -1.88
TNFP01375 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 RN7SKP116-201ENST00000516902 319 ntBASIC3.31□□□□□ -1.88
TNFP01375 HIGD1AP18-201ENST00000520730 278 ntBASIC3.31□□□□□ -1.88
TNFP01375 AP006245.1-201ENST00000522549 120 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFP01375 MIR5680-201ENST00000577577 84 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFP01375 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.31□□□□□ -1.88
TNFP01375 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 CKS1BP3-201ENST00000600888 237 ntBASIC3.31□□□□□ -1.88
TNFP01375 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFP01375 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
TNFP01375 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AP001002.2-201ENST00000625137 386 ntBASIC3.31□□□□□ -1.88
TNFP01375 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AC127502.3-201ENST00000636170 1206 ntBASIC3.31□□□□□ -1.88
TNFP01375 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 TNPO1P3-201ENST00000436471 2662 ntBASIC3.31□□□□□ -1.88
TNFP01375 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.31□□□□□ -1.88
TNFP01375 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFP01375 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFP01375 AC107021.2-201ENST00000567714 2095 ntBASIC3.31□□□□□ -1.88
TNFP01375 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.3□□□□□ -1.88
TNFP01375 HSPA8P1-201ENST00000425843 1833 ntBASIC3.3□□□□□ -1.88
TNFP01375 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms