Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL442163.2-201ENST00000553912 710 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 SERPINE4P-201ENST00000554978 281 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFBP01127 RNA5SP108-201ENST00000605921 117 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AP002360.3-201ENST00000607673 710 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 FRG1HP-204ENST00000617940 757 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFBP01127 AC015914.2-201ENST00000618167 288 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC253576.2-201ENST00000618815 580 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFBP01127 AC138907.10-201ENST00000623708 983 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC106730.3-201ENST00000624568 641 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AP003400.6-201ENST00000624698 740 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 SCARNA15.3-201ENST00000626315 122 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 SCARNA4.1-201ENST00000628597 123 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 MIR3651-201ENST00000630427 90 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFBP01127 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PDGFBP01127 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFBP01127 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFBP01127 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.75
PDGFBP01127 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFBP01127 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFBP01127 AC017007.4-201ENST00000503353 1352 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDGFBP01127 RNU6-543P-201ENST00000362576 108 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 RNU6-792P-201ENST00000363490 107 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 RNU6-1339P-201ENST00000363574 91 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 RNU6-356P-201ENST00000384140 107 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 MIR153-1-201ENST00000384914 90 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC062016.2-201ENST00000420950 676 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AL159987.2-201ENST00000432754 307 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.14□□□□□ -1.75
PDGFBP01127 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 MRPL48P1-201ENST00000445390 636 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC115115.1-201ENST00000449927 248 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 VN1R32P-201ENST00000452234 905 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFBP01127 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFBP01127 RN7SKP13-201ENST00000515933 244 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC007991.1-201ENST00000522680 631 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFBP01127 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFBP01127 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFBP01127 AL031985.2-201ENST00000600955 480 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC018926.3-201ENST00000618841 406 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AL163051.2-201ENST00000618976 735 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC097460.3-201ENST00000623099 442 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 AC103798.2-201ENST00000624292 632 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 FAM157B-203ENST00000639350 358 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFBP01127 MTCO1P14-201ENST00000441695 1559 ntBASIC4.14□□□□□ -1.75
PDGFBP01127 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PDGFBP01127 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PDGFBP01127 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFBP01127 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDGFBP01127 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AL592494.2-201ENST00000425455 1548 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 RNA5SP307-201ENST00000362863 116 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 RNU1-83P-201ENST00000363426 164 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 SNORA70E-201ENST00000384492 135 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AL391219.1-201ENST00000422570 483 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFBP01127 RPS6P12-201ENST00000432491 726 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFBP01127 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFBP01127 AP001486.1-201ENST00000463339 476 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC146507.1-201ENST00000468335 354 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC112206.1-201ENST00000468416 477 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 AC078857.1-201ENST00000469870 667 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 HSPD1P15-201ENST00000505573 1122 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.13□□□□□ -1.75
PDGFBP01127 AC133963.2-201ENST00000513686 578 ntBASIC4.13□□□□□ -1.75
PDGFBP01127 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms