Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AL121877.1-201ENST00000453704 622 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.14□□□□□ -1.91
SNRNP200O75643 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 AC092868.3-201ENST00000560515 784 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 AL162713.1-201ENST00000604480 262 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
SNRNP200O75643 ATP5A1P2-202ENST00000616464 443 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNRNP200O75643 AC007496.3-201ENST00000624987 3443 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 AC119744.1-201ENST00000454746 1715 ntBASIC3.14□□□□□ -1.91
SNRNP200O75643 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNRNP200O75643 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNRNP200O75643 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 AC005326.1-201ENST00000429197 123 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 HSPE1P27-201ENST00000430808 296 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AL353705.1-201ENST00000433468 480 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC011242.1-201ENST00000433596 1158 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 RPL7P28-201ENST00000437739 740 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 RPS12P18-201ENST00000442381 270 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC026427.2-201ENST00000506228 536 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.13□□□□□ -1.91
SNRNP200O75643 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.13□□□□□ -1.91
SNRNP200O75643 AC011611.1-201ENST00000552179 197 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.13□□□□□ -1.91
SNRNP200O75643 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.13□□□□□ -1.91
SNRNP200O75643 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.13□□□□□ -1.91
SNRNP200O75643 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 uc_338.32-201ENST00000615087 172 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.13□□□□□ -1.91
SNRNP200O75643 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNRNP200O75643 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 AL031985.3-201ENST00000565390 2449 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 RPL23AP57-201ENST00000332361 466 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 Y_RNA.333-201ENST00000365274 102 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 HMGB3P14-201ENST00000494195 599 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 HMGB1P21-201ENST00000502313 581 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 RN7SKP57-201ENST00000517248 293 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 CD24P2-201ENST00000565486 219 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.13□□□□□ -1.91
SNRNP200O75643 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNRNP200O75643 RNVU1-4-201ENST00000612985 164 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.13□□□□□ -1.91
SNRNP200O75643 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.13□□□□□ -1.91
SNRNP200O75643 CEP170P1-201ENST00000502249 4587 ntBASIC3.13□□□□□ -1.91
SNRNP200O75643 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.12□□□□□ -1.91
SNRNP200O75643 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNRNP200O75643 MTND5P1-201ENST00000445440 1375 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 RHEBP3-201ENST00000411920 351 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 RPS29P4-201ENST00000414733 161 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
SNRNP200O75643 AC097713.2-201ENST00000430199 356 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 HMGB3P10-201ENST00000434734 572 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 AC099063.2-201ENST00000446360 662 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.12□□□□□ -1.91
SNRNP200O75643 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.12□□□□□ -1.91
SNRNP200O75643 AC107918.3-201ENST00000533272 382 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.12□□□□□ -1.91
SNRNP200O75643 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.12□□□□□ -1.91
SNRNP200O75643 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.12□□□□□ -1.91
SNRNP200O75643 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.12□□□□□ -1.91
SNRNP200O75643 BNIP3P22-201ENST00000593399 556 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 AL157817.1-201ENST00000614264 790 ntBASIC3.12□□□□□ -1.91
SNRNP200O75643 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.12□□□□□ -1.91
SNRNP200O75643 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SNRNP200O75643 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
SNRNP200O75643 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNRNP200O75643 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SNRNP200O75643 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNRNP200O75643 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.11□□□□□ -1.91
SNRNP200O75643 MIR1183-201ENST00000408856 89 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 ISCA1P2-201ENST00000438679 421 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 AL162388.1-201ENST00000450912 352 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.11□□□□□ -1.91
SNRNP200O75643 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.11□□□□□ -1.91
SNRNP200O75643 APOOP4-201ENST00000513530 597 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.11□□□□□ -1.91
SNRNP200O75643 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.11□□□□□ -1.91
SNRNP200O75643 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.11□□□□□ -1.91
SNRNP200O75643 OR4R3P-201ENST00000525084 838 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.11□□□□□ -1.91
SNRNP200O75643 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.11□□□□□ -1.91
SNRNP200O75643 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.11□□□□□ -1.91
SNRNP200O75643 AC084036.1-201ENST00000609190 508 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 AC095050.2-201ENST00000510748 1458 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SNRNP200O75643 AC058791.1-201ENST00000608412 3198 ntBASIC3.11□□□□□ -1.91
SNRNP200O75643 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms