Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 IGKV2-36-201ENST00000519999 223 ntBASIC3.72□□□□□ -1.81
HCN1O60741 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.72□□□□□ -1.81
HCN1O60741 GNRHR2P1-201ENST00000555315 631 ntBASIC3.72□□□□□ -1.81
HCN1O60741 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN1O60741 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.72□□□□□ -1.81
HCN1O60741 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.72□□□□□ -1.81
HCN1O60741 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.72□□□□□ -1.81
HCN1O60741 MIR1254-2-201ENST00000579553 63 ntBASIC3.72□□□□□ -1.81
HCN1O60741 AC053481.4-201ENST00000583164 216 ntBASIC3.72□□□□□ -1.81
HCN1O60741 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.72□□□□□ -1.81
HCN1O60741 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.72□□□□□ -1.81
HCN1O60741 AL109618.2-201ENST00000605527 211 ntBASIC3.72□□□□□ -1.81
HCN1O60741 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
HCN1O60741 AC034229.5-201ENST00000624258 185 ntBASIC3.72□□□□□ -1.81
HCN1O60741 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
HCN1O60741 AC138649.5-201ENST00000637456 137 ntBASIC3.72□□□□□ -1.81
HCN1O60741 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.72□□□□□ -1.81
HCN1O60741 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.72□□□□□ -1.81
HCN1O60741 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HCN1O60741 MTND5P11-201ENST00000511037 1812 ntBASIC3.72□□□□□ -1.81
HCN1O60741 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HCN1O60741 RPS4XP5-202ENST00000449995 1334 ntBASIC3.71□□□□□ -1.81
HCN1O60741 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 AL590290.1-201ENST00000405336 380 ntBASIC3.71□□□□□ -1.82
HCN1O60741 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
HCN1O60741 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 AC005189.1-201ENST00000431286 310 ntBASIC3.71□□□□□ -1.82
HCN1O60741 RPS26P40-201ENST00000435209 294 ntBASIC3.71□□□□□ -1.82
HCN1O60741 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 AC074367.1-201ENST00000438685 1125 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AC006011.1-201ENST00000442758 349 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AC239367.2-201ENST00000447309 705 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AL359073.1-201ENST00000448036 403 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 AC110792.1-201ENST00000491826 472 ntBASIC3.71□□□□□ -1.82
HCN1O60741 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
HCN1O60741 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 AC010460.1-201ENST00000507087 466 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 SNORA70.14-201ENST00000516205 110 ntBASIC3.71□□□□□ -1.82
HCN1O60741 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 OR4C2P-201ENST00000530855 1064 ntBASIC3.71□□□□□ -1.82
HCN1O60741 OSBPL9P3-201ENST00000534523 595 ntBASIC3.71□□□□□ -1.82
HCN1O60741 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 AC009101.1-201ENST00000568135 242 ntBASIC3.71□□□□□ -1.82
HCN1O60741 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 AC092474.3-201ENST00000603022 568 ntBASIC3.71□□□□□ -1.82
HCN1O60741 MRPS35P3-201ENST00000603189 709 ntBASIC3.71□□□□□ -1.82
HCN1O60741 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
HCN1O60741 AL512506.1-201ENST00000613918 449 ntBASIC3.71□□□□□ -1.82
HCN1O60741 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 ZNF33CP-201ENST00000432492 2030 ntBASIC3.71□□□□□ -1.82
HCN1O60741 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN1O60741 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HCN1O60741 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN1O60741 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN1O60741 AC106871.1-201ENST00000568324 3102 ntBASIC3.7□□□□□ -1.82
HCN1O60741 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN1O60741 LINC00561-201ENST00000565815 2738 ntBASIC3.7□□□□□ -1.82
HCN1O60741 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 SNORD35B-201ENST00000363660 87 ntBASIC3.7□□□□□ -1.82
HCN1O60741 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HCN1O60741 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 HMGB3P18-201ENST00000406327 590 ntBASIC3.7□□□□□ -1.82
HCN1O60741 MIR1251-201ENST00000408552 70 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AL121882.1-201ENST00000422893 417 ntBASIC3.7□□□□□ -1.82
HCN1O60741 VN1R42P-201ENST00000424651 344 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN1O60741 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 NPM1P34-201ENST00000428821 893 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 AL512661.1-201ENST00000434586 1253 ntBASIC3.7□□□□□ -1.82
HCN1O60741 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN1O60741 RN7SL93P-201ENST00000463035 293 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms