Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC104651.1-201ENST00000427559 735 ntBASIC4.84□□□□□ -1.63
PROM1O43490 COX6CP13-201ENST00000428703 226 ntBASIC4.84□□□□□ -1.63
PROM1O43490 MRPS10P2-201ENST00000431226 381 ntBASIC4.84□□□□□ -1.63
PROM1O43490 PSMD10P3-201ENST00000437000 448 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 Z80107.2-201ENST00000445127 392 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 RPL7P59-201ENST00000447700 943 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AC239809.1-201ENST00000450470 217 ntBASIC4.84□□□□□ -1.63
PROM1O43490 ARPC3P2-201ENST00000457786 533 ntBASIC4.84□□□□□ -1.63
PROM1O43490 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
PROM1O43490 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
PROM1O43490 AC011352.3-201ENST00000505162 593 ntBASIC4.84□□□□□ -1.63
PROM1O43490 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PROM1O43490 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 RNU6-885P-201ENST00000516607 104 ntBASIC4.84□□□□□ -1.63
PROM1O43490 RNA5SP135-201ENST00000517019 125 ntBASIC4.84□□□□□ -1.63
PROM1O43490 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PROM1O43490 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 AP000676.2-201ENST00000529711 301 ntBASIC4.84□□□□□ -1.63
PROM1O43490 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.84□□□□□ -1.63
PROM1O43490 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 AC090751.1-201ENST00000566966 267 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AC138915.2-201ENST00000569776 97 ntBASIC4.84□□□□□ -1.63
PROM1O43490 OR1F2P-201ENST00000570470 933 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.84□□□□□ -1.63
PROM1O43490 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.84□□□□□ -1.63
PROM1O43490 AC018926.3-201ENST00000618841 406 ntBASIC4.84□□□□□ -1.63
PROM1O43490 AC015726.3-201ENST00000624501 418 ntBASIC4.84□□□□□ -1.63
PROM1O43490 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
PROM1O43490 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PROM1O43490 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PROM1O43490 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PROM1O43490 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 Z95327.2-201ENST00000414579 1873 ntBASIC4.83□□□□□ -1.64
PROM1O43490 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 PABPC1P9-201ENST00000426076 1612 ntBASIC4.83□□□□□ -1.64
PROM1O43490 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PROM1O43490 CR383658.2-201ENST00000547576 1525 ntBASIC4.83□□□□□ -1.64
PROM1O43490 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 AC022893.2-201ENST00000564832 3296 ntBASIC4.83□□□□□ -1.64
PROM1O43490 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 RN7SKP113-201ENST00000363891 295 ntBASIC4.83□□□□□ -1.64
PROM1O43490 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 SNORA2.3-201ENST00000383920 135 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AL078599.1-201ENST00000402075 293 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC068533.2-201ENST00000411872 306 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 AL513175.1-201ENST00000431492 780 ntBASIC4.83□□□□□ -1.64
PROM1O43490 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 RPL21P133-201ENST00000443666 476 ntBASIC4.83□□□□□ -1.64
PROM1O43490 KNOP1P3-201ENST00000446933 426 ntBASIC4.83□□□□□ -1.64
PROM1O43490 EPS15P1-201ENST00000448836 336 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC073850.1-201ENST00000449243 255 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC092647.2-201ENST00000452998 253 ntBASIC4.83□□□□□ -1.64
PROM1O43490 RNA5SP269-201ENST00000459032 137 ntBASIC4.83□□□□□ -1.64
PROM1O43490 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PROM1O43490 RPL7L1P13-201ENST00000511702 739 ntBASIC4.83□□□□□ -1.64
PROM1O43490 SNORD116-26-201ENST00000516006 96 ntBASIC4.83□□□□□ -1.64
PROM1O43490 RNY4P37-201ENST00000516225 96 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 OR6C7P-201ENST00000547875 934 ntBASIC4.83□□□□□ -1.64
PROM1O43490 CR383656.6-201ENST00000550518 394 ntBASIC4.83□□□□□ -1.64
PROM1O43490 GTF2IP22-201ENST00000554443 182 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC087481.2-201ENST00000565492 330 ntBASIC4.83□□□□□ -1.64
PROM1O43490 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 AC110743.1-201ENST00000584870 478 ntBASIC4.83□□□□□ -1.64
PROM1O43490 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 ELOCP28-201ENST00000590044 317 ntBASIC4.83□□□□□ -1.64
PROM1O43490 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 NDUFA8P1-201ENST00000605525 367 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC018695.5-201ENST00000605872 315 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC126118.1-201ENST00000607744 628 ntBASIC4.83□□□□□ -1.64
PROM1O43490 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 AP004247.3-201ENST00000608682 624 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AC012414.7-202ENST00000622705 1090 ntBASIC4.83□□□□□ -1.64
PROM1O43490 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.83□□□□□ -1.64
PROM1O43490 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 MAPK10-349ENST00000641767 3661 ntBASIC4.83□□□□□ -1.64
PROM1O43490 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PROM1O43490 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.83□□□□□ -1.64
PROM1O43490 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PROM1O43490 AL592437.2-201ENST00000421655 2434 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms