Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC087821.2-201ENST00000637086 450 ntBASIC4.12□□□□□ -1.75
CLDN4O14493 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLDN4O14493 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN4O14493 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN4O14493 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN4O14493 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN4O14493 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLDN4O14493 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 AC008033.1-201ENST00000216407 1162 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 RNA5SP509-201ENST00000364577 119 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 MIR23A-201ENST00000385245 73 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AL079342.2-201ENST00000403367 482 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 RPP40P1-201ENST00000426762 456 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 RAC1P8-201ENST00000427086 527 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 OR4F13P-201ENST00000428478 931 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC008065.1-201ENST00000428525 348 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 RPS6P12-201ENST00000432491 726 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 AL512326.1-201ENST00000443050 721 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN4O14493 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 Z99714.1-201ENST00000450463 807 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC011276.1-201ENST00000469688 323 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 RN7SL303P-201ENST00000469773 251 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC020898.1-201ENST00000474167 787 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC113420.1-201ENST00000507903 571 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN4O14493 OR5BC1P-201ENST00000529327 739 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN4O14493 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 AL352979.3-201ENST00000553515 247 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.11□□□□□ -1.75
CLDN4O14493 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.11□□□□□ -1.75
CLDN4O14493 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 RPL23AP97-201ENST00000568955 471 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 AP000240.1-201ENST00000609910 452 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AL592148.2-201ENST00000612210 372 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN4O14493 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 AC000367.1-201ENST00000452711 1766 ntBASIC4.11□□□□□ -1.75
CLDN4O14493 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
CLDN4O14493 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CLDN4O14493 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.11□□□□□ -1.75
CLDN4O14493 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLDN4O14493 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.1□□□□□ -1.75
CLDN4O14493 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC008725.1-201ENST00000605123 2263 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 EIF2AP4-201ENST00000424793 1781 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLDN4O14493 MIR448-201ENST00000362131 111 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RNA5SP388-201ENST00000362584 119 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RNU1-20P-201ENST00000363314 162 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RNU4-25P-201ENST00000410569 230 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC009237.2-201ENST00000421358 284 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC233981.1-201ENST00000423224 461 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.1□□□□□ -1.75
CLDN4O14493 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 UBE2V1P1-201ENST00000430836 445 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 PPIAP17-201ENST00000438507 471 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC087385.1-201ENST00000475062 312 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 S100A11P1-201ENST00000477525 312 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RN7SL817P-201ENST00000480777 288 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC069528.1-202ENST00000482888 637 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 DYNLL1P6-201ENST00000503440 264 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.1□□□□□ -1.75
CLDN4O14493 AC093824.1-201ENST00000508796 343 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RNU6-885P-201ENST00000516607 104 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 RNA5SP135-201ENST00000517019 125 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 OR4C2P-201ENST00000530855 1064 ntBASIC4.1□□□□□ -1.75
CLDN4O14493 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms