Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC006116.10-201ENST00000591836 581 ntBASIC2.91□□□□□ -1.94
SDCBPO00560 AC005972.3-201ENST00000606304 481 ntBASIC2.91□□□□□ -1.94
SDCBPO00560 AC103710.3-201ENST00000608157 948 ntBASIC2.91□□□□□ -1.94
SDCBPO00560 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.91□□□□□ -1.94
SDCBPO00560 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDCBPO00560 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDCBPO00560 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDCBPO00560 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.9□□□□□ -1.94
SDCBPO00560 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SDCBPO00560 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SDCBPO00560 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SDCBPO00560 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 RNU6-225P-201ENST00000384613 103 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 SKINT1L-201ENST00000401057 817 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AL034374.1-201ENST00000406329 351 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 RN7SKP159-201ENST00000410657 292 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 CYCSP19-201ENST00000411715 316 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AC017079.2-201ENST00000416102 485 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AIMP1P1-201ENST00000418670 937 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 DBIP2-201ENST00000419076 262 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SDCBPO00560 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.9□□□□□ -1.95
SDCBPO00560 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.9□□□□□ -1.95
SDCBPO00560 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.9□□□□□ -1.95
SDCBPO00560 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.9□□□□□ -1.95
SDCBPO00560 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.9□□□□□ -1.95
SDCBPO00560 SNORD105B-201ENST00000458770 79 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 RPL23AP67-201ENST00000465341 474 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AL161747.1-201ENST00000480068 358 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AC021205.2-201ENST00000480069 347 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AL049830.2-201ENST00000480072 201 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 ACTR3P3-201ENST00000480448 893 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 SNORA64.4-201ENST00000516632 81 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 SNORA70.18-201ENST00000516696 98 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 EIF4EP5-201ENST00000528228 640 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AL389895.1-201ENST00000554127 252 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.9□□□□□ -1.95
SDCBPO00560 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.9□□□□□ -1.95
SDCBPO00560 VN1R84P-201ENST00000593697 235 ntBASIC2.9□□□□□ -1.95
SDCBPO00560 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.9□□□□□ -1.95
SDCBPO00560 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.9□□□□□ -1.95
SDCBPO00560 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.9□□□□□ -1.95
SDCBPO00560 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDCBPO00560 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 ZNF826P-207ENST00000622273 1910 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.89□□□□□ -1.95
SDCBPO00560 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 AL136964.1-201ENST00000622038 2990 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.89□□□□□ -1.95
SDCBPO00560 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SDCBPO00560 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SDCBPO00560 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 RNU6-805P-201ENST00000365643 106 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 RPL21P17-201ENST00000397467 475 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 MTCO3P31-201ENST00000405526 789 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 RNU6ATAC-201ENST00000408749 126 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC126124.2-201ENST00000413542 321 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.89□□□□□ -1.95
SDCBPO00560 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.89□□□□□ -1.95
SDCBPO00560 AC073069.1-201ENST00000428657 441 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 ARF4P2-201ENST00000430209 526 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 MTCO3P21-201ENST00000430791 643 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AL445584.1-201ENST00000431451 330 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.89□□□□□ -1.95
SDCBPO00560 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.89□□□□□ -1.95
SDCBPO00560 AC105402.2-201ENST00000438503 358 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 AC097262.1-201ENST00000452559 548 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 HMGB1P21-201ENST00000502313 581 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 CDH12P2-201ENST00000504393 298 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.89□□□□□ -1.95
SDCBPO00560 TXNP6-201ENST00000510190 310 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 IGKV2-23-201ENST00000518729 323 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC104027.1-201ENST00000521887 300 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.89□□□□□ -1.95
SDCBPO00560 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 AL845331.3-202ENST00000562856 261 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.89□□□□□ -1.95
SDCBPO00560 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.89□□□□□ -1.95
SDCBPO00560 SNORA35B-201ENST00000607417 129 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 MIR7851-201ENST00000610611 160 ntBASIC2.89□□□□□ -1.95
SDCBPO00560 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.89□□□□□ -1.95
SDCBPO00560 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.89□□□□□ -1.95
SDCBPO00560 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.89□□□□□ -1.95
SDCBPO00560 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SDCBPO00560 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms