Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 BRDTP1-201ENST00000605735 677 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC073530.2-201ENST00000623987 261 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.65□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL049781.1-201ENST00000623195 3585 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC073073.2-201ENST00000609827 2578 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNU6-146P-201ENST00000384602 108 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CR848007.2-201ENST00000424918 787 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RPS29P31-201ENST00000446147 164 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CCRL1P1-201ENST00000449542 1053 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RPL31P20-201ENST00000449593 360 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 MRPS31P2-201ENST00000451581 518 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CYCSP35-201ENST00000451978 304 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC010307.1-201ENST00000467206 836 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RN7SL293P-201ENST00000481765 281 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CDH12P2-201ENST00000504393 298 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 WBP1LP4-201ENST00000505043 344 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC104619.4-201ENST00000510773 249 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNORD116-26-201ENST00000516006 96 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTND2P7-201ENST00000521337 640 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC109635.6-201ENST00000525487 1113 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CYP2C60P-201ENST00000566088 139 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC116447.1-201ENST00000613153 453 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 CASC19-284ENST00000642142 1868 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 SPATA2P1-201ENST00000431223 2055 ntBASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTND4P21-201ENST00000453886 1357 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR421-201ENST00000365696 85 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MIR183-201ENST00000384958 110 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC009237.5-201ENST00000414271 501 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 OR4F13P-201ENST00000428478 931 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 ZFAND6P1-201ENST00000434138 605 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 KCTD9P3-201ENST00000434597 1169 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MTND6P32-201ENST00000457611 483 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC074250.1-201ENST00000511117 192 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 SOD1P3-201ENST00000518682 454 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC087272.1-201ENST00000523624 533 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC018552.3-201ENST00000567416 561 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC020914.6-201ENST00000594327 272 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 EIF1P6-201ENST00000600054 334 ntBASIC3.63□□□□□ -1.83
TMX2-CTNND1H3BSU7 AC010591.1-201ENST00000603941 649 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms