Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 RNA5SP391-201ENST00000363456 119 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 RNU6-444P-201ENST00000383988 108 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 SETP14-201ENST00000497538 873 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC147055.4-201ENST00000504399 745 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 RNA5SP249-201ENST00000516127 99 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC027309.2-201ENST00000520566 192 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AP000790.1-201ENST00000528891 737 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC090515.3-201ENST00000560431 315 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC072039.2-201ENST00000608883 439 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC097505.1-201ENST00000610199 565 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC009704.2-201ENST00000618739 483 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC025031.4-201ENST00000621248 3271 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 MTND5P31-201ENST00000419366 1374 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 MTND4P34-201ENST00000572715 1371 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.63□□□□□ -1.67
TBC1D3FA6NER0 AL731566.1-201ENST00000620490 1937 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 XPOTP1-201ENST00000443317 2398 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 BMS1P3-201ENST00000372011 932 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RNU6-1293P-201ENST00000384077 107 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 SKINT1L-201ENST00000401057 817 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL049693.1-201ENST00000402760 611 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL121978.1-201ENST00000402778 359 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 TMBIM7P-201ENST00000418074 855 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL592293.2-201ENST00000422292 996 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RPL12P34-201ENST00000424532 479 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RPL31P54-201ENST00000429803 370 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RPS25P9-201ENST00000435591 252 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RSL24D1P3-201ENST00000449255 495 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RNA5SP103-201ENST00000459503 118 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC068587.1-201ENST00000483613 781 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RPL7P38-201ENST00000488396 739 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 HMGB3P16-201ENST00000508037 287 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 MTCO1P30-201ENST00000515244 580 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RNU6-759P-201ENST00000516740 103 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 RNU6-232P-201ENST00000517144 64 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC105129.1-201ENST00000560250 297 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 CYCSP40-201ENST00000575927 294 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 ISCA1P3-201ENST00000577104 373 ntBASIC4.62□□□□□ -1.67
TBC1D3FA6NER0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms