Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CHEK2P2-201ENST00000554701 672 ntBASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 RN7SL32P-201ENST00000580514 281 ntBASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AP005119.1-201ENST00000580956 292 ntBASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AL512782.1-201ENST00000603093 364 ntBASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 AC005899.6-201ENST00000620729 297 ntBASIC5.22□□□□□ -1.57
SHISA3A0PJX4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SHISA3A0PJX4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.21□□□□□ -1.57
SHISA3A0PJX4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RNA5SP258-201ENST00000362750 119 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 Y_RNA.202-201ENST00000364083 110 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RNU4-26P-201ENST00000410270 107 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 NPM1P40-201ENST00000412758 733 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC012065.2-201ENST00000421295 375 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 BEND7P1-201ENST00000422058 457 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 CHIAP3-201ENST00000423668 1133 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RN7SL372P-201ENST00000461982 298 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC091885.1-201ENST00000506658 268 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC021146.1-201ENST00000511202 716 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC104057.1-201ENST00000515547 497 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RNU6-347P-201ENST00000516658 105 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AL352979.3-201ENST00000553515 247 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC026464.5-201ENST00000562497 722 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC018552.3-201ENST00000567416 561 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 UBE2L4-201ENST00000587688 464 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 GLUD1P4-201ENST00000590914 418 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 RNU6-89P-201ENST00000606519 100 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AL596245.1-201ENST00000618994 362 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AL138693.1-201ENST00000622219 129 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC004972.1-201ENST00000623934 2209 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
SHISA3A0PJX4 AC009902.3-201ENST00000606235 2172 ntBASIC5.21□□□□□ -1.58
SHISA3A0PJX4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AL034546.1-201ENST00000623740 3693 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHISA3A0PJX4 AC010894.1-201ENST00000313760 361 ntBASIC5.2□□□□□ -1.58
SHISA3A0PJX4 RNU6-97P-201ENST00000363387 104 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms