Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRFN1Q9P244 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRFN1Q9P244 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.71■□□□□ 0.42
LRFN1Q9P244 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 TERF1P1-201ENST00000311003 1181 ntBASIC17.7■□□□□ 0.42
LRFN1Q9P244 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.7■□□□□ 0.42
LRFN1Q9P244 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 LIN28AP1-201ENST00000429574 405 ntBASIC17.7■□□□□ 0.42
LRFN1Q9P244 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 ECEL1P2-202ENST00000465689 757 ntBASIC17.7■□□□□ 0.42
LRFN1Q9P244 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRFN1Q9P244 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRFN1Q9P244 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.7■□□□□ 0.42
LRFN1Q9P244 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 KRT18P57-201ENST00000443599 1254 ntBASIC17.69■□□□□ 0.42
LRFN1Q9P244 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRFN1Q9P244 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.69■□□□□ 0.42
LRFN1Q9P244 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 AC112907.3-201ENST00000577781 2400 ntBASIC17.68■□□□□ 0.42
LRFN1Q9P244 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 CCR12P-201ENST00000446203 998 ntBASIC17.68■□□□□ 0.42
LRFN1Q9P244 ATP5G1P1-201ENST00000448724 379 ntBASIC17.68■□□□□ 0.42
LRFN1Q9P244 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 AC116562.4-202ENST00000641738 218 ntBASIC17.68■□□□□ 0.42
LRFN1Q9P244 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
LRFN1Q9P244 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRFN1Q9P244 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.67■□□□□ 0.42
LRFN1Q9P244 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRFN1Q9P244 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms