Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CISHQ9NSE2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.61■□□□□ 0.89
CISHQ9NSE2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 FAM197Y1-201ENST00000421178 764 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 Z85996.1-201ENST00000494644 937 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 CD177P1-201ENST00000606252 935 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 AC113410.3-201ENST00000623366 203 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 AL049637.2-201ENST00000641778 930 ntBASIC20.6■□□□□ 0.89
CISHQ9NSE2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.6■□□□□ 0.89
CISHQ9NSE2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CISHQ9NSE2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 AP001412.1-201ENST00000608405 714 ntBASIC20.59■□□□□ 0.89
CISHQ9NSE2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CISHQ9NSE2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CISHQ9NSE2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 AL031985.4-201ENST00000642138 673 ntBASIC20.58■□□□□ 0.89
CISHQ9NSE2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CISHQ9NSE2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CISHQ9NSE2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CISHQ9NSE2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CISHQ9NSE2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CISHQ9NSE2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CISHQ9NSE2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CISHQ9NSE2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CISHQ9NSE2 KRT8P41-201ENST00000533985 1514 ntBASIC20.58■□□□□ 0.88
CISHQ9NSE2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.58■□□□□ 0.88
CISHQ9NSE2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.58■□□□□ 0.88
CISHQ9NSE2 TEX21P-204ENST00000641479 1693 ntBASIC20.58■□□□□ 0.88
CISHQ9NSE2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.58■□□□□ 0.88
CISHQ9NSE2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
CISHQ9NSE2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CISHQ9NSE2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms