Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 AC020907.5-201ENST00000624372 1936 ntBASIC19.96■□□□□ 0.79
HPS4Q9NQG7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 SLC25A1P2-201ENST00000430693 912 ntBASIC19.96■□□□□ 0.79
HPS4Q9NQG7 AC007663.1-201ENST00000438948 1240 ntBASIC19.96■□□□□ 0.79
HPS4Q9NQG7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS4Q9NQG7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 FEM1AP1-201ENST00000431297 1995 ntBASIC19.95■□□□□ 0.78
HPS4Q9NQG7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 CCR12P-201ENST00000446203 998 ntBASIC19.95■□□□□ 0.78
HPS4Q9NQG7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 AC063952.2-201ENST00000498792 1227 ntBASIC19.95■□□□□ 0.78
HPS4Q9NQG7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 AC022616.7-201ENST00000525383 220 ntBASIC19.95■□□□□ 0.78
HPS4Q9NQG7 AL160286.2-201ENST00000567150 934 ntBASIC19.95■□□□□ 0.78
HPS4Q9NQG7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS4Q9NQG7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 AC092338.2-201ENST00000568827 1415 ntBASIC19.94■□□□□ 0.78
HPS4Q9NQG7 LINC01465-201ENST00000408887 1940 ntBASIC19.94■□□□□ 0.78
HPS4Q9NQG7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 LINC01006-201ENST00000333319 2292 ntBASIC19.94■□□□□ 0.78
HPS4Q9NQG7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 AL023803.3-201ENST00000615559 522 ntBASIC19.94■□□□□ 0.78
HPS4Q9NQG7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HPS4Q9NQG7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 AC139887.4-201ENST00000607877 719 ntBASIC19.93■□□□□ 0.78
HPS4Q9NQG7 AC010653.2-201ENST00000623505 997 ntBASIC19.93■□□□□ 0.78
HPS4Q9NQG7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HPS4Q9NQG7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms