Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a2Q9JLR1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Gm6433-201ENSMUST00000118634 875 ntBASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Gm27000-201ENSMUST00000182943 842 ntBASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a2Q9JLR1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a2Q9JLR1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Gm13836-201ENSMUST00000121159 501 ntBASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sec61a2Q9JLR1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms