Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
VPS33BQ9H267 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
VPS33BQ9H267 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.26■■□□□ 1.31
VPS33BQ9H267 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
VPS33BQ9H267 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VPS33BQ9H267 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
VPS33BQ9H267 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
VPS33BQ9H267 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
VPS33BQ9H267 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.23■■□□□ 1.31
VPS33BQ9H267 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 AP002383.4-201ENST00000442518 975 ntBASIC23.22■■□□□ 1.31
VPS33BQ9H267 KRT8P26-201ENST00000534154 1276 ntBASIC23.22■■□□□ 1.31
VPS33BQ9H267 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 AC026310.3-201ENST00000625186 2373 ntBASIC23.22■■□□□ 1.31
VPS33BQ9H267 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
VPS33BQ9H267 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
VPS33BQ9H267 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 AL845331.1-201ENST00000424978 1190 ntBASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
VPS33BQ9H267 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.21■■□□□ 1.31
VPS33BQ9H267 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms