Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 BOLL-205ENST00000433157 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 TSPY20P-201ENST00000450910 630 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 KATNBL1P4-201ENST00000503545 918 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC023632.3-201ENST00000521633 145 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC092337.1-201ENST00000568699 1129 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC005829.2-201ENST00000571422 1056 ntBASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A3Q96HJ5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 KRT8P20-201ENST00000423953 1409 ntBASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 KRT8P17-201ENST00000453110 1448 ntBASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 AL390719.1-204ENST00000412397 1219 ntBASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 AL031963.3-201ENST00000606441 850 ntBASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 MTCO1P15-201ENST00000529569 1526 ntBASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A3Q96HJ5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 AC007613.1-201ENST00000572811 2597 ntBASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 ESRRAP1-201ENST00000400596 1257 ntBASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 AC097655.1-201ENST00000635075 318 ntBASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
MS4A3Q96HJ5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MS4A3Q96HJ5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
MS4A3Q96HJ5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 HLA-G-202ENST00000376815 851 ntBASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 HLA-G-203ENST00000376818 1127 ntBASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.39■□□□□ 0.37
MS4A3Q96HJ5 AC008403.3-201ENST00000598924 454 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms