Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 LINC01311-201ENST00000565162 1445 ntBASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 GCSHP2-201ENST00000560971 527 ntBASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 NEK4P2-201ENST00000580004 1012 ntBASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 HYMAI.1-201ENST00000620949 238 ntBASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 AC012313.10-201ENST00000623509 926 ntBASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SNRNP40Q96DI7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNRNP40Q96DI7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 FEM1AP1-201ENST00000431297 1995 ntBASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 ATP5G2P1-201ENST00000433580 426 ntBASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.35■□□□□ 0.37
SNRNP40Q96DI7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.34■□□□□ 0.37
SNRNP40Q96DI7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms