Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CCR12P-201ENST00000446203 998 ntBASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 CKBP1-201ENST00000565489 1086 ntBASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SLC38A9Q8NBW4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC38A9Q8NBW4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SLC38A9Q8NBW4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 HMGA1P5-201ENST00000412453 271 ntBASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC38A9Q8NBW4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 WWOX-216ENST00000569818 525 ntBASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 AL138966.2-201ENST00000621997 464 ntBASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 AC104417.2-201ENST00000562989 1793 ntBASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC38A9Q8NBW4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 KRT8P11-201ENST00000409686 1436 ntBASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 AL353719.1-201ENST00000566847 864 ntBASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 AC010653.2-201ENST00000623505 997 ntBASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC38A9Q8NBW4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC38A9Q8NBW4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms