Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 AL138781.2-201ENST00000617896 1843 ntBASIC21.8■■□□□ 1.08
SHC4Q6S5L8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SHC4Q6S5L8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.79■■□□□ 1.08
SHC4Q6S5L8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ID1-201ENST00000376105 1233 ntBASIC21.78■■□□□ 1.08
SHC4Q6S5L8 AC233263.1-201ENST00000578059 224 ntBASIC21.78■■□□□ 1.08
SHC4Q6S5L8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SHC4Q6S5L8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
SHC4Q6S5L8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.77■■□□□ 1.07
SHC4Q6S5L8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SHC4Q6S5L8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 RNA5SP413-201ENST00000516373 109 ntBASIC21.76■■□□□ 1.07
SHC4Q6S5L8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 AP003097.1-201ENST00000530657 1135 ntBASIC21.76■■□□□ 1.07
SHC4Q6S5L8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SHC4Q6S5L8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms