Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 AP001005.1-201ENST00000571755 1248 ntBASIC16.78■□□□□ 0.28
LRRK2Q5S007 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 MIR4674-201ENST00000582457 87 ntBASIC16.78■□□□□ 0.28
LRRK2Q5S007 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRK2Q5S007 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRK2Q5S007 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 AF238378.1-201ENST00000526806 358 ntBASIC16.77■□□□□ 0.28
LRRK2Q5S007 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 AC074051.2-201ENST00000565115 352 ntBASIC16.77■□□□□ 0.28
LRRK2Q5S007 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRK2Q5S007 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRK2Q5S007 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRK2Q5S007 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRK2Q5S007 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRK2Q5S007 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRK2Q5S007 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRK2Q5S007 AL117328.2-201ENST00000624617 1940 ntBASIC16.77■□□□□ 0.27
LRRK2Q5S007 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 FAM197Y8-203ENST00000450145 560 ntBASIC16.76■□□□□ 0.27
LRRK2Q5S007 AC004967.1-201ENST00000453589 447 ntBASIC16.76■□□□□ 0.27
LRRK2Q5S007 SEC1P-202ENST00000473944 940 ntBASIC16.76■□□□□ 0.27
LRRK2Q5S007 TP73-AS1-207ENST00000624167 988 ntBASIC16.76■□□□□ 0.27
LRRK2Q5S007 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRK2Q5S007 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRK2Q5S007 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AF186996.4-201ENST00000467186 377 ntBASIC16.75■□□□□ 0.27
LRRK2Q5S007 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AC098831.1-202ENST00000438821 336 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms