Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP46P62068 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP46P62068 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP46P62068 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.31■□□□□ 0.84
USP46P62068 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP46P62068 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP46P62068 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
USP46P62068 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.31■□□□□ 0.84
USP46P62068 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
USP46P62068 RCN1P1-201ENST00000400413 996 ntBASIC20.31■□□□□ 0.84
USP46P62068 CRYGFP-201ENST00000418459 633 ntBASIC20.31■□□□□ 0.84
USP46P62068 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.31■□□□□ 0.84
USP46P62068 NAPSB-206ENST00000562112 1266 ntBASIC20.31■□□□□ 0.84
USP46P62068 AP005242.2-201ENST00000580065 1175 ntBASIC20.31■□□□□ 0.84
USP46P62068 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP46P62068 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.3■□□□□ 0.84
USP46P62068 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.3■□□□□ 0.84
USP46P62068 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.3■□□□□ 0.84
USP46P62068 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 SLC25A1P4-201ENST00000567977 778 ntBASIC20.3■□□□□ 0.84
USP46P62068 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.3■□□□□ 0.84
USP46P62068 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP46P62068 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 LINC01568-207ENST00000641790 1380 ntBASIC20.3■□□□□ 0.84
USP46P62068 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP46P62068 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.29■□□□□ 0.84
USP46P62068 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
USP46P62068 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 KRT8P41-201ENST00000533985 1514 ntBASIC20.29■□□□□ 0.84
USP46P62068 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.29■□□□□ 0.84
USP46P62068 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.29■□□□□ 0.84
USP46P62068 FAM207BP-201ENST00000447172 505 ntBASIC20.29■□□□□ 0.84
USP46P62068 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.29■□□□□ 0.84
USP46P62068 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.29■□□□□ 0.84
USP46P62068 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.29■□□□□ 0.84
USP46P62068 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP46P62068 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.28■□□□□ 0.84
USP46P62068 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.28■□□□□ 0.84
USP46P62068 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.28■□□□□ 0.84
USP46P62068 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.28■□□□□ 0.84
USP46P62068 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.28■□□□□ 0.84
USP46P62068 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
USP46P62068 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.28■□□□□ 0.84
USP46P62068 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.28■□□□□ 0.84
USP46P62068 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP46P62068 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.27■□□□□ 0.84
USP46P62068 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms