Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.92■□□□□ 0.78
PMS2P54278 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS2P54278 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.92■□□□□ 0.78
PMS2P54278 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PMS2P54278 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PMS2P54278 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.91■□□□□ 0.78
PMS2P54278 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 AC069152.1-201ENST00000438030 544 ntBASIC19.91■□□□□ 0.78
PMS2P54278 CNN2P6-201ENST00000439038 900 ntBASIC19.91■□□□□ 0.78
PMS2P54278 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PMS2P54278 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PMS2P54278 AC090164.3-201ENST00000610780 2143 ntBASIC19.91■□□□□ 0.78
PMS2P54278 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 WIZP1-201ENST00000531444 2299 ntBASIC19.91■□□□□ 0.78
PMS2P54278 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.91■□□□□ 0.78
PMS2P54278 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.91■□□□□ 0.78
PMS2P54278 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS2P54278 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 AF201337.1-201ENST00000520239 748 ntBASIC19.9■□□□□ 0.78
PMS2P54278 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.9■□□□□ 0.78
PMS2P54278 AC133552.2-202ENST00000575694 574 ntBASIC19.9■□□□□ 0.78
PMS2P54278 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 AL031598.1-201ENST00000561511 1773 ntBASIC19.9■□□□□ 0.78
PMS2P54278 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS2P54278 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS2P54278 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS2P54278 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.89■□□□□ 0.78
PMS2P54278 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PMS2P54278 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS2P54278 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS2P54278 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PMS2P54278 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS2P54278 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS2P54278 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS2P54278 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS2P54278 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 AC007322.4-201ENST00000509611 723 ntBASIC19.89■□□□□ 0.77
PMS2P54278 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS2P54278 AC066615.1-201ENST00000640911 628 ntBASIC19.89■□□□□ 0.77
PMS2P54278 AC133041.1-202ENST00000642053 222 ntBASIC19.89■□□□□ 0.77
PMS2P54278 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PMS2P54278 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS2P54278 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms