Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS1P54277 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
PMS1P54277 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.25■□□□□ 0.99
PMS1P54277 AP003097.1-201ENST00000530657 1135 ntBASIC21.25■□□□□ 0.99
PMS1P54277 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.25■□□□□ 0.99
PMS1P54277 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.25■□□□□ 0.99
PMS1P54277 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.25■□□□□ 0.99
PMS1P54277 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.25■□□□□ 0.99
PMS1P54277 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PMS1P54277 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS1P54277 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS1P54277 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.24■□□□□ 0.99
PMS1P54277 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS1P54277 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.24■□□□□ 0.99
PMS1P54277 MTDHP1-201ENST00000605323 784 ntBASIC21.24■□□□□ 0.99
PMS1P54277 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.24■□□□□ 0.99
PMS1P54277 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PMS1P54277 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PMS1P54277 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.23■□□□□ 0.99
PMS1P54277 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.23■□□□□ 0.99
PMS1P54277 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS1P54277 IRX1P1-201ENST00000438849 1838 ntBASIC21.23■□□□□ 0.99
PMS1P54277 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.23■□□□□ 0.99
PMS1P54277 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS1P54277 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 AC069544.1-201ENST00000609399 999 ntBASIC21.23■□□□□ 0.99
PMS1P54277 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.23■□□□□ 0.99
PMS1P54277 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.23■□□□□ 0.99
PMS1P54277 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PMS1P54277 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PMS1P54277 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.22■□□□□ 0.99
PMS1P54277 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PMS1P54277 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
PMS1P54277 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PMS1P54277 AC026366.1-201ENST00000488803 879 ntBASIC21.22■□□□□ 0.99
PMS1P54277 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.22■□□□□ 0.99
PMS1P54277 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.22■□□□□ 0.99
PMS1P54277 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PMS1P54277 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 NBPF21P-201ENST00000425093 1451 ntBASIC21.21■□□□□ 0.99
PMS1P54277 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PMS1P54277 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.21■□□□□ 0.99
PMS1P54277 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS1P54277 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.21■□□□□ 0.99
PMS1P54277 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS1P54277 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.21■□□□□ 0.99
PMS1P54277 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PMS1P54277 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms