Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.25■□□□□ 0.67
HMGCLP35914 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 AC113410.3-201ENST00000623366 203 ntBASIC19.25■□□□□ 0.67
HMGCLP35914 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.25■□□□□ 0.67
HMGCLP35914 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGCLP35914 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGCLP35914 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGCLP35914 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HMGCLP35914 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGCLP35914 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGCLP35914 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HMGCLP35914 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HMGCLP35914 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HMGCLP35914 FAM197Y1-201ENST00000421178 764 ntBASIC19.24■□□□□ 0.67
HMGCLP35914 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGCLP35914 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.24■□□□□ 0.67
HMGCLP35914 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.24■□□□□ 0.67
HMGCLP35914 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 KRT8P41-201ENST00000533985 1514 ntBASIC19.24■□□□□ 0.67
HMGCLP35914 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HMGCLP35914 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGCLP35914 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCLP35914 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCLP35914 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.23■□□□□ 0.67
HMGCLP35914 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCLP35914 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HMGCLP35914 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.23■□□□□ 0.67
HMGCLP35914 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCLP35914 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGCLP35914 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGCLP35914 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGCLP35914 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.22■□□□□ 0.67
HMGCLP35914 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.22■□□□□ 0.67
HMGCLP35914 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HMGCLP35914 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.22■□□□□ 0.67
HMGCLP35914 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGCLP35914 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HMGCLP35914 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGCLP35914 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGCLP35914 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGCLP35914 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLP35914 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HMGCLP35914 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCLP35914 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCLP35914 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLP35914 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.21■□□□□ 0.67
HMGCLP35914 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.21■□□□□ 0.67
HMGCLP35914 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HMGCLP35914 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGCLP35914 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGCLP35914 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HMGCLP35914 AC141586.3-201ENST00000562166 1838 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms