Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.25■■□□□ 1.31
CHGBP05060 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.25■■□□□ 1.31
CHGBP05060 AC131212.4-201ENST00000623606 975 ntBASIC23.25■■□□□ 1.31
CHGBP05060 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC23.25■■□□□ 1.31
CHGBP05060 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.24■■□□□ 1.31
CHGBP05060 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
CHGBP05060 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.24■■□□□ 1.31
CHGBP05060 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.24■■□□□ 1.31
CHGBP05060 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.24■■□□□ 1.31
CHGBP05060 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.24■■□□□ 1.31
CHGBP05060 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CHGBP05060 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
CHGBP05060 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.23■■□□□ 1.31
CHGBP05060 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.23■■□□□ 1.31
CHGBP05060 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CHGBP05060 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.23■■□□□ 1.31
CHGBP05060 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.23■■□□□ 1.31
CHGBP05060 AC011298.2-201ENST00000617989 482 ntBASIC23.23■■□□□ 1.31
CHGBP05060 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.23■■□□□ 1.31
CHGBP05060 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CHGBP05060 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.23■■□□□ 1.31
CHGBP05060 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHGBP05060 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.22■■□□□ 1.31
CHGBP05060 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.22■■□□□ 1.31
CHGBP05060 KRT17P2-201ENST00000300992 1314 ntBASIC23.22■■□□□ 1.31
CHGBP05060 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 CYP2D8P-201ENST00000433633 1490 ntBASIC23.22■■□□□ 1.31
CHGBP05060 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.22■■□□□ 1.31
CHGBP05060 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 TEX21P-204ENST00000641479 1693 ntBASIC23.22■■□□□ 1.31
CHGBP05060 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHGBP05060 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.22■■□□□ 1.31
CHGBP05060 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.21■■□□□ 1.31
CHGBP05060 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHGBP05060 AL032819.2-201ENST00000624543 2162 ntBASIC23.21■■□□□ 1.31
CHGBP05060 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.21■■□□□ 1.31
CHGBP05060 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.21■■□□□ 1.31
CHGBP05060 AC026271.3-201ENST00000571884 352 ntBASIC23.21■■□□□ 1.31
CHGBP05060 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CHGBP05060 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.21■■□□□ 1.31
CHGBP05060 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.21■■□□□ 1.31
CHGBP05060 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CHGBP05060 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHGBP05060 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHGBP05060 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms