Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 EMBP1-201ENST00000458200 901 ntBASIC20.92■□□□□ 0.94
TIMP1P01033 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 KRT8P26-201ENST00000534154 1276 ntBASIC20.92■□□□□ 0.94
TIMP1P01033 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.92■□□□□ 0.94
TIMP1P01033 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TIMP1P01033 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TIMP1P01033 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 AC004263.2-201ENST00000617183 678 ntBASIC20.92■□□□□ 0.94
TIMP1P01033 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.92■□□□□ 0.94
TIMP1P01033 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMP1P01033 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.92■□□□□ 0.94
TIMP1P01033 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.92■□□□□ 0.94
TIMP1P01033 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMP1P01033 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TIMP1P01033 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TIMP1P01033 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.91■□□□□ 0.94
TIMP1P01033 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.91■□□□□ 0.94
TIMP1P01033 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TIMP1P01033 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TIMP1P01033 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.91■□□□□ 0.94
TIMP1P01033 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.91■□□□□ 0.94
TIMP1P01033 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.91■□□□□ 0.94
TIMP1P01033 AC104692.2-201ENST00000603054 253 ntBASIC20.91■□□□□ 0.94
TIMP1P01033 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.91■□□□□ 0.94
TIMP1P01033 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
TIMP1P01033 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
TIMP1P01033 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.9■□□□□ 0.94
TIMP1P01033 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.9■□□□□ 0.94
TIMP1P01033 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TIMP1P01033 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 AL022342.1-201ENST00000400363 863 ntBASIC20.9■□□□□ 0.94
TIMP1P01033 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 TSPY19P-201ENST00000418461 509 ntBASIC20.9■□□□□ 0.94
TIMP1P01033 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 TSPY18P-201ENST00000441642 509 ntBASIC20.9■□□□□ 0.94
TIMP1P01033 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.9■□□□□ 0.94
TIMP1P01033 AL031008.1-201ENST00000619963 541 ntBASIC20.9■□□□□ 0.94
TIMP1P01033 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMP1P01033 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TIMP1P01033 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TIMP1P01033 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TIMP1P01033 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.89■□□□□ 0.94
TIMP1P01033 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.89■□□□□ 0.93
TIMP1P01033 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.89■□□□□ 0.93
TIMP1P01033 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TIMP1P01033 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TIMP1P01033 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.89■□□□□ 0.93
TIMP1P01033 CHCHD2P8-201ENST00000429873 447 ntBASIC20.89■□□□□ 0.93
TIMP1P01033 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TIMP1P01033 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.89■□□□□ 0.93
TIMP1P01033 AL160237.2-201ENST00000556165 472 ntBASIC20.89■□□□□ 0.93
TIMP1P01033 AC024243.1-201ENST00000609234 778 ntBASIC20.89■□□□□ 0.93
TIMP1P01033 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.89■□□□□ 0.93
TIMP1P01033 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TIMP1P01033 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMP1P01033 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.88■□□□□ 0.93
TIMP1P01033 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TIMP1P01033 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TIMP1P01033 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms