Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.41■□□□□ 0.38
ZIC3O60481 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ZIC3O60481 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZIC3O60481 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.41■□□□□ 0.38
ZIC3O60481 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 MMP23A-201ENST00000234610 1017 ntBASIC17.4■□□□□ 0.38
ZIC3O60481 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 MIR1238-201ENST00000408483 83 ntBASIC17.4■□□□□ 0.38
ZIC3O60481 FAM207BP-201ENST00000447172 505 ntBASIC17.4■□□□□ 0.38
ZIC3O60481 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 AC097488.1-201ENST00000507834 756 ntBASIC17.4■□□□□ 0.38
ZIC3O60481 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.4■□□□□ 0.38
ZIC3O60481 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.4■□□□□ 0.38
ZIC3O60481 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.4■□□□□ 0.38
ZIC3O60481 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZIC3O60481 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.4■□□□□ 0.38
ZIC3O60481 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.4■□□□□ 0.38
ZIC3O60481 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ZIC3O60481 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZIC3O60481 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.39■□□□□ 0.38
ZIC3O60481 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZIC3O60481 AL390955.1-201ENST00000428694 934 ntBASIC17.39■□□□□ 0.37
ZIC3O60481 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.39■□□□□ 0.37
ZIC3O60481 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.39■□□□□ 0.37
ZIC3O60481 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.39■□□□□ 0.37
ZIC3O60481 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.39■□□□□ 0.37
ZIC3O60481 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
ZIC3O60481 KRT8P9-201ENST00000558927 1449 ntBASIC17.38■□□□□ 0.37
ZIC3O60481 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.38■□□□□ 0.37
ZIC3O60481 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.38■□□□□ 0.37
ZIC3O60481 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
ZIC3O60481 AC087499.1-201ENST00000418141 1075 ntBASIC17.38■□□□□ 0.37
ZIC3O60481 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
ZIC3O60481 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.38■□□□□ 0.37
ZIC3O60481 SLC25A1P4-201ENST00000567977 778 ntBASIC17.38■□□□□ 0.37
ZIC3O60481 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.38■□□□□ 0.37
ZIC3O60481 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.38■□□□□ 0.37
ZIC3O60481 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZIC3O60481 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZIC3O60481 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZIC3O60481 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZIC3O60481 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.37■□□□□ 0.37
ZIC3O60481 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ZIC3O60481 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms