Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL049796.1-201ENST00000565336 1766 ntBASIC33.14■■■□□ 2.9
CUX2O14529 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC33.13■■■□□ 2.89
CUX2O14529 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
CUX2O14529 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CUX2O14529 KRT8P17-201ENST00000453110 1448 ntBASIC33.13■■■□□ 2.89
CUX2O14529 KRT18P67-201ENST00000432816 1264 ntBASIC33.13■■■□□ 2.89
CUX2O14529 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC33.13■■■□□ 2.89
CUX2O14529 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC33.13■■■□□ 2.89
CUX2O14529 AF238378.1-201ENST00000526806 358 ntBASIC33.13■■■□□ 2.89
CUX2O14529 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC33.13■■■□□ 2.89
CUX2O14529 MIR7706-201ENST00000613747 67 ntBASIC33.13■■■□□ 2.89
CUX2O14529 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CUX2O14529 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CUX2O14529 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC33.12■■■□□ 2.89
CUX2O14529 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC33.12■■■□□ 2.89
CUX2O14529 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC33.12■■■□□ 2.89
CUX2O14529 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CUX2O14529 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CUX2O14529 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC33.12■■■□□ 2.89
CUX2O14529 AL121603.2-201ENST00000557373 2117 ntBASIC33.12■■■□□ 2.89
CUX2O14529 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CUX2O14529 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC33.12■■■□□ 2.89
CUX2O14529 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC33.12■■■□□ 2.89
CUX2O14529 TSPY22P-201ENST00000427496 604 ntBASIC33.12■■■□□ 2.89
CUX2O14529 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CUX2O14529 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC33.11■■■□□ 2.89
CUX2O14529 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CUX2O14529 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CUX2O14529 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CUX2O14529 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CUX2O14529 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC33.11■■■□□ 2.89
CUX2O14529 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
CUX2O14529 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC33.11■■■□□ 2.89
CUX2O14529 HLA-J-202ENST00000469281 1241 ntBASIC33.11■■■□□ 2.89
CUX2O14529 MOK-208ENST00000519058 917 ntTSL 2 BASIC33.11■■■□□ 2.89
CUX2O14529 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC33.11■■■□□ 2.89
CUX2O14529 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC33.11■■■□□ 2.89
CUX2O14529 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CUX2O14529 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC33.11■■■□□ 2.89
CUX2O14529 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CUX2O14529 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC33.1■■■□□ 2.89
CUX2O14529 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CUX2O14529 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC33.1■■■□□ 2.89
CUX2O14529 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CUX2O14529 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC33.1■■■□□ 2.89
CUX2O14529 AL035633.1-201ENST00000406139 838 ntBASIC33.1■■■□□ 2.89
CUX2O14529 GPX1P2-201ENST00000429271 606 ntBASIC33.1■■■□□ 2.89
CUX2O14529 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC33.1■■■□□ 2.89
CUX2O14529 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
CUX2O14529 AC121338.2-201ENST00000622535 1744 ntBASIC33.1■■■□□ 2.89
CUX2O14529 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
CUX2O14529 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CUX2O14529 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC33.09■■■□□ 2.89
CUX2O14529 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CUX2O14529 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC33.09■■■□□ 2.89
CUX2O14529 RPSAP43-201ENST00000402237 625 ntBASIC33.09■■■□□ 2.89
CUX2O14529 AC010327.4-202ENST00000591484 748 ntBASIC33.09■■■□□ 2.89
CUX2O14529 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC33.09■■■□□ 2.89
CUX2O14529 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC33.09■■■□□ 2.89
CUX2O14529 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CUX2O14529 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
CUX2O14529 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
CUX2O14529 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC33.08■■■□□ 2.89
CUX2O14529 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
CUX2O14529 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CUX2O14529 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC33.08■■■□□ 2.89
CUX2O14529 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC33.08■■■□□ 2.89
CUX2O14529 AC074051.2-201ENST00000565115 352 ntBASIC33.08■■■□□ 2.89
CUX2O14529 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC33.08■■■□□ 2.89
CUX2O14529 RPS15-207ENST00000591032 550 ntTSL 3 BASIC33.08■■■□□ 2.89
CUX2O14529 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CUX2O14529 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 SPEG-225ENST00000617028 815 ntTSL 5 BASIC33.07■■■□□ 2.88
CUX2O14529 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 AC012676.1-201ENST00000574705 1949 ntBASIC33.07■■■□□ 2.88
CUX2O14529 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CUX2O14529 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 MED22-202ENST00000371999 987 ntTSL 3 BASIC33.06■■■□□ 2.88
CUX2O14529 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 WBP2-203ENST00000433525 928 ntTSL 2 BASIC33.06■■■□□ 2.88
CUX2O14529 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC33.06■■■□□ 2.88
CUX2O14529 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
CUX2O14529 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC33.06■■■□□ 2.88
CUX2O14529 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
CUX2O14529 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC33.06■■■□□ 2.88
CUX2O14529 AC018553.1-201ENST00000616682 1458 ntBASIC33.06■■■□□ 2.88
CUX2O14529 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CUX2O14529 GAD2-202ENST00000376248 680 ntTSL 5 BASIC33.05■■■□□ 2.88
CUX2O14529 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC33.05■■■□□ 2.88
CUX2O14529 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CUX2O14529 AC004967.1-201ENST00000453589 447 ntBASIC33.05■■■□□ 2.88
CUX2O14529 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC33.05■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms