Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 KRT18P29-201ENST00000397031 1267 ntBASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 C1QL1P1-201ENST00000568105 661 ntBASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 AC233263.1-201ENST00000578059 224 ntBASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 AL023875.1-201ENST00000640777 796 ntBASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV2A0A0B4J234 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV2A0A0B4J234 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 AL353807.1-201ENST00000427475 662 ntBASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 TSPY20P-201ENST00000450910 630 ntBASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TRAV2A0A0B4J234 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
TRAV2A0A0B4J234 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 C1QBPP2-201ENST00000528754 825 ntBASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 AC125437.2-201ENST00000625180 2167 ntBASIC14.58□□□□□ -0.08
TRAV2A0A0B4J234 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms