Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DEFB109D-201ENST00000529497 240 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC005363.1-201ENST00000530779 351 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC026470.2-201ENST00000561492 181 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 MYL12BP1-201ENST00000569826 507 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC104662.1-201ENST00000604448 511 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC133644.2-201ENST00000608142 540 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC012409.4-201ENST00000612923 249 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AP001486.3-201ENST00000615334 372 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC111152.1-202ENST00000635848 339 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AC074141.1-201ENST00000588129 2995 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 AL442639.1-201ENST00000625030 1899 ntBASIC6.39□□□□□ -1.39
PCDHB11Q9Y5F2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 RNU6-601P-201ENST00000384540 107 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL359092.1-201ENST00000417156 265 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 RPS17P17-201ENST00000419392 409 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL359265.2-201ENST00000434367 631 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 H2AFZP6-201ENST00000444403 394 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 RPL21P23-201ENST00000446654 460 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL161722.1-201ENST00000446972 1032 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC144530.1-201ENST00000452862 555 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 PLGLA-201ENST00000465668 449 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC087879.1-201ENST00000474343 374 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC010655.3-201ENST00000478818 450 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC079140.5-201ENST00000507882 310 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC002456.2-201ENST00000509356 380 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC018797.1-201ENST00000510791 255 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC026801.2-201ENST00000515352 425 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 RNU2-10P-201ENST00000516375 211 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 IGHV3-57-201ENST00000520143 280 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AP000676.2-201ENST00000529711 301 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC024224.1-201ENST00000538284 609 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC068993.1-201ENST00000546724 589 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC090651.1-201ENST00000567865 634 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 MIR5583-1-201ENST00000580941 59 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AL122023.1-201ENST00000622847 530 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC022400.9-201ENST00000623633 273 ntBASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PCDHB11Q9Y5F2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms