Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
VPS9D1Q9Y2B5 AC241584.2-201ENST00000637142 2090 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC100810.3-201ENST00000633189 2240 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 SPATA31B1P-201ENST00000434692 4016 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RPL12P13-201ENST00000310055 497 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RNU1-76P-201ENST00000362903 159 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RNY1P16-201ENST00000363063 111 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-47P-201ENST00000383866 107 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-921P-201ENST00000384361 107 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP236-201ENST00000410635 284 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RPS26P40-201ENST00000435209 294 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 GAPDHP48-201ENST00000436626 961 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 UBBP5-201ENST00000446970 266 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 SETP20-201ENST00000457046 852 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC091982.1-202ENST00000473923 343 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC084198.1-201ENST00000477747 402 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AP001086.1-201ENST00000494882 321 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 SEPT14P8-201ENST00000508026 178 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 DCAF13P2-201ENST00000514188 555 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-911P-201ENST00000516523 104 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 DUX4L52-201ENST00000549363 777 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC087575.1-201ENST00000585087 229 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC093227.2-201ENST00000589357 285 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 NANOGP3-201ENST00000605855 286 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 AC092821.2-201ENST00000545710 2042 ntBASIC7□□□□□ -1.29
VPS9D1Q9Y2B5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC090740.1-201ENST00000623193 2262 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-188P-201ENST00000364207 107 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RNU5E-6P-201ENST00000365574 115 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-393P-201ENST00000384475 107 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP222-201ENST00000410651 315 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.626-201ENST00000411288 95 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 HMGN1P24-201ENST00000412282 298 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 SNX18P13-201ENST00000412442 529 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RAC1P7-201ENST00000445367 377 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AL929410.2-201ENST00000451170 189 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AP001992.1-205ENST00000462248 379 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AL591122.1-201ENST00000487348 492 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-919P-201ENST00000516731 104 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC100784.1-201ENST00000522790 310 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 FAM60DP-201ENST00000524174 632 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CYCSP27-201ENST00000527643 293 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 OR5M6P-201ENST00000530227 937 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC025423.5-201ENST00000550230 219 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC009852.2-201ENST00000567898 485 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ACTG1P15-201ENST00000570019 1063 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms