Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC096586.1-201ENST00000610267 561 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AC067852.7-201ENST00000623270 535 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL356863.1-201ENST00000623378 1080 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL773545.4-201ENST00000637262 310 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 AL513478.4-201ENST00000641636 310 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF6Q9Y252 SAGE2P-201ENST00000420011 2126 ntBASIC3.82□□□□□ -1.8
RNF6Q9Y252 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF6Q9Y252 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 RNU6-1339P-201ENST00000363574 91 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 RNA5SP130-201ENST00000364431 114 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 MIR525-201ENST00000384978 85 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AMD1P2-201ENST00000412936 992 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL450992.3-201ENST00000413192 568 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC108032.1-201ENST00000416706 207 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPS12P23-201ENST00000419579 400 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL606495.1-201ENST00000422100 813 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPS26P30-201ENST00000443431 335 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPL21P89-201ENST00000444021 467 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 HMGB1P48-201ENST00000446155 598 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 RN7SL132P-201ENST00000478131 296 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 RPL21P47-201ENST00000483696 477 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 HMGB1P21-201ENST00000502313 581 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 HPRT1P2-201ENST00000505250 544 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC090071.1-201ENST00000507713 644 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AP000916.1-201ENST00000533869 835 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AP003717.3-201ENST00000544832 1180 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL136520.1-202ENST00000555494 763 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 AC113194.1-201ENST00000606037 500 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 RNU4-89P-201ENST00000607443 133 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 MIR8084-201ENST00000614105 89 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 MIR6875-201ENST00000617506 72 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AL445363.3-201ENST00000623080 671 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 AP003400.6-201ENST00000624698 740 ntBASIC3.81□□□□□ -1.8
RNF6Q9Y252 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF6Q9Y252 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF6Q9Y252 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 OR11H5P-202ENST00000641612 1325 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 Z82217.1-201ENST00000625157 8149 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 MIR554-201ENST00000384874 96 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RNF6Q9Y252 RPL21P65-201ENST00000406094 466 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 RN7SKP182-201ENST00000410772 298 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 RN7SKP33-201ENST00000410942 340 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 RWDD4P2-201ENST00000426392 563 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC092170.1-201ENST00000440211 356 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC004865.1-201ENST00000442276 1003 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC017099.1-201ENST00000448261 1028 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 NDUFS5P3-201ENST00000450668 321 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 RPL5P32-201ENST00000454085 879 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 RWDD4P1-201ENST00000488019 565 ntBASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.8□□□□□ -1.8
RNF6Q9Y252 AC005351.1-201ENST00000511152 786 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms